RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RPS20P60866 119 aaKnown RBP8.41□□□□□ -1.06
SNCA-202ENST00000345009 CLLU1Q5K131 121 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 Q6ZTI0 123 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 RASL10AQ92737 203 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 NDUFAF3Q9BU61 184 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 C11orf21Q9P2W6 132 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 F5H768 121 aa8.4□□□□□ -1.06
SNCA-202ENST00000345009 P01737 135 aa8.4□□□□□ -1.06
SNCA-202ENST00000345009 SRP19P09132 144 aaKnown RBP8.4□□□□□ -1.06
SNCA-202ENST00000345009 LINC00612Q8N6U2 182 aa8.4□□□□□ -1.06
SNCA-202ENST00000345009 C18orf15Q96N68 181 aa8.4□□□□□ -1.06
SNCA-202ENST00000345009 IL36BQ9NZH7 164 aa8.4□□□□□ -1.06
SNCA-202ENST00000345009 DNAH7Q8WXX0 4024 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 TRBV20OR9-2A0A075B6H5 130 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 TMSB15BA0A087X1C1 80 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 IGLL5B9A064 214 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 IGLV2-8P01709 118 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 SLAQ13239 276 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 ZNF876PQ49A33 203 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 SOHLH1Q5JUK2 328 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 DNLZQ5SXM8 178 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 SYT8Q8NBV8 401 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 OCC1Q8TAD7 63 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 PTH2Q96A98 100 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
SNCA-202ENST00000345009 PHLDA3Q9Y5J5 127 aa8.39□□□□□ -1.07
SNCA-202ENST00000345009 GRIFINA4D1Z8 144 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 CIDEAO60543 219 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 CXCL1P09341 107 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 IFITM2Q01629 132 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 TMEM241Q24JQ0 296 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 OR2D3Q8NGH3 330 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
SNCA-202ENST00000345009 MUC4Q99102 2169 aa8.37□□□□□ -1.07
SNCA-202ENST00000345009 PGPEP1LA6NFU8 196 aa8.37□□□□□ -1.07
SNCA-202ENST00000345009 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
SNCA-202ENST00000345009 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
SNCA-202ENST00000345009 RNASE3P12724 160 aaKnown RBP8.37□□□□□ -1.07
SNCA-202ENST00000345009 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
SNCA-202ENST00000345009 IGHV4-4A0A075B6R2 117 aa8.36□□□□□ -1.07
SNCA-202ENST00000345009 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
SNCA-202ENST00000345009 H3BVH4 76 aa8.36□□□□□ -1.07
SNCA-202ENST00000345009 ERVFC1-1P60608 527 aa8.36□□□□□ -1.07
SNCA-202ENST00000345009 ZFP82Q8N141 532 aa8.36□□□□□ -1.07
SNCA-202ENST00000345009 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
SNCA-202ENST00000345009 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
SNCA-202ENST00000345009 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 A0A1W2PPQ1 181 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 A8MWV9 139 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 SRSF3P84103 164 aaKnown RBP8.35□□□□□ -1.07
SNCA-202ENST00000345009 UQCC3Q6UW78 93 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 FAM231DQ6ZW35 169 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 LINC01551Q86U37 167 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 C15orf54Q8N8G6 183 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 NUDT11Q96G61 164 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
SNCA-202ENST00000345009 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
SNCA-202ENST00000345009 F2Z2F3 143 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 K7EN84 100 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
SNCA-202ENST00000345009 OR5AL1P0C617 328 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 RPL19P84098 196 aaKnown RBP8.34□□□□□ -1.07
SNCA-202ENST00000345009 SPANXN1Q5VSR9 72 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 TMEM88Q6PEY1 159 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
SNCA-202ENST00000345009 CSMD3Q7Z407 3707 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 A8MWL6 223 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 C9JQL5 133 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 H3BNG1 76 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 M0R381 172 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 SFTA3P0C7M3 94 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 FER1L6-AS1Q8NA97 138 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 TPPP3Q9BW30 176 aa8.33□□□□□ -1.08
SNCA-202ENST00000345009 RNASE7Q9H1E1 156 aaKnown RBP8.33□□□□□ -1.08
SNCA-202ENST00000345009 RHODO00212 210 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 RS1O15537 224 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 SNAI2O43623 268 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 HOXA5P20719 270 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 CACNG7P62955 275 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 ADIRFQ15847 76 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 CT83Q5H943 113 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 CFAP126Q5VTH2 177 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 ZFP2Q6ZN57 461 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 OSTCQ9NRP0 149 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 APLNQ9ULZ1 77 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 NACAE9PAV3 2078 aa8.32□□□□□ -1.08
SNCA-202ENST00000345009 NUDT3O95989 172 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 SMIM17P0DL12 118 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 P0DMU3 169 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 FAM231AP0DMU4 169 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 FAM231CP0DMU5 169 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms