RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 H3BVH4 76 aa14.65□□□□□ -0.06
SMARCB1-202ENST00000344921 RPL19P84098 196 aaKnown RBP14.65□□□□□ -0.06
SMARCB1-202ENST00000344921 DYNC2H1Q8NCM8 4307 aaKnown RBP14.65□□□□□ -0.06
SMARCB1-202ENST00000344921 HOXA5P20719 270 aa14.64□□□□□ -0.07
SMARCB1-202ENST00000344921 SRP19P09132 144 aaKnown RBP14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 ARMS2P0C7Q2 107 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 IL36BQ9NZH7 164 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 NDUFS6O75380 124 aaKnown RBP14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 LY6G6CO95867 125 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 SFTA3P0C7M3 94 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 PEA15Q15121 130 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 LINC00518Q8N0U6 118 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 OR4C5Q8NGB2 326 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 OCC1Q8TAD7 63 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 SEC11CQ9BY50 192 aa14.63□□□□□ -0.07
SMARCB1-202ENST00000344921 TRAV26-1A0A087WT03 109 aa14.62□□□□□ -0.07
SMARCB1-202ENST00000344921 A0A0J9YY99 117 aa14.62□□□□□ -0.07
SMARCB1-202ENST00000344921 LCE6AA0A183 80 aa14.62□□□□□ -0.07
SMARCB1-202ENST00000344921 SNAPINO95295 136 aa14.62□□□□□ -0.07
SMARCB1-202ENST00000344921 DNLZQ5SXM8 178 aa14.62□□□□□ -0.07
SMARCB1-202ENST00000344921 SMIM7Q9BQ49 75 aa14.62□□□□□ -0.07
SMARCB1-202ENST00000344921 TRGV4A0A0C4DH28 118 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 P01737 135 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 FAM74A3Q4VXF1 159 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 C15orf53Q8NAA6 179 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 PHLDA3Q9Y5J5 127 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 MUC4Q99102 2169 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 TRAV4A0A0B4J268 109 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 ZNF727A8MUV8 499 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 NUDT3O95989 172 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 LINC00476Q8WZB0 136 aa14.61□□□□□ -0.07
SMARCB1-202ENST00000344921 KMT2CQ8NEZ4 4911 aaKnown RBP14.6□□□□□ -0.07
SMARCB1-202ENST00000344921 ZNF575Q86XF7 245 aa14.6□□□□□ -0.07
SMARCB1-202ENST00000344921 OR2D3Q8NGH3 330 aa14.6□□□□□ -0.07
SMARCB1-202ENST00000344921 C19orf71A6NCJ1 209 aa14.59□□□□□ -0.07
SMARCB1-202ENST00000344921 SRSF3P84103 164 aaKnown RBP14.59□□□□□ -0.07
SMARCB1-202ENST00000344921 POM121L12Q8N7R1 296 aa14.59□□□□□ -0.07
SMARCB1-202ENST00000344921 SYT8Q8NBV8 401 aa14.59□□□□□ -0.07
SMARCB1-202ENST00000344921 K7EN84 100 aa14.58□□□□□ -0.07
SMARCB1-202ENST00000344921 PTH2Q96A98 100 aa14.58□□□□□ -0.07
SMARCB1-202ENST00000344921 SMDT1Q9H4I9 107 aa14.58□□□□□ -0.07
SMARCB1-202ENST00000344921 HHLA3Q9XRX5 114 aa14.58□□□□□ -0.07
SMARCB1-202ENST00000344921 SLAQ13239 276 aa14.58□□□□□ -0.08
SMARCB1-202ENST00000344921 FHL2Q14192 279 aa14.58□□□□□ -0.08
SMARCB1-202ENST00000344921 LGALS9CQ6DKI2 356 aa14.58□□□□□ -0.08
SMARCB1-202ENST00000344921 LYSTQ99698 3801 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 XKRY2A2RUG3 117 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 F8W036 122 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 M0R381 172 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 CXCL1P09341 107 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 RPS20P60866 119 aaKnown RBP14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 DMRTA1Q5VZB9 504 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 NUDT10Q8NFP7 164 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 NUDT11Q96G61 164 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 RNASE7Q9H1E1 156 aaKnown RBP14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 PRO0255Q9UI72 69 aa14.57□□□□□ -0.08
SMARCB1-202ENST00000344921 C9JQL5 133 aa14.56□□□□□ -0.08
SMARCB1-202ENST00000344921 PAX4O43316 350 aa14.56□□□□□ -0.08
SMARCB1-202ENST00000344921 CFAP126Q5VTH2 177 aa14.56□□□□□ -0.08
SMARCB1-202ENST00000344921 RS1O15537 224 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 P0DMU3 169 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 FAM231AP0DMU4 169 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 FAM231CP0DMU5 169 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 MED14OSP0DP75 135 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 GZMBP10144 247 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 ADCYAP1P18509 176 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 S100A12P80511 92 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 ZFP82Q8N141 532 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 TPPP3Q9BW30 176 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 SCRT2Q9NQ03 307 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 LY96Q9Y6Y9 160 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 IGHV3-73A0A0B4J1V6 119 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 A8MWV9 139 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 PIK3CD-AS1Q5SR53 167 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 VSIG2Q96IQ7 327 aa14.55□□□□□ -0.08
SMARCB1-202ENST00000344921 H3BNG1 76 aa14.54□□□□□ -0.08
SMARCB1-202ENST00000344921 CRYBA4P53673 196 aa14.54□□□□□ -0.08
SMARCB1-202ENST00000344921 SSTP61278 116 aa14.54□□□□□ -0.08
SMARCB1-202ENST00000344921 UBE2DNLQ8IWF7 75 aa14.54□□□□□ -0.08
SMARCB1-202ENST00000344921 NACAE9PAV3 2078 aa14.54□□□□□ -0.08
SMARCB1-202ENST00000344921 MUC21A0A0G2JKD1 596 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 MUC21A0A140T8X8 626 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 ERVFC1-1P60608 527 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 CTAG1AP78358 180 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 TMEM241Q24JQ0 296 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 SPANXN1Q5VSR9 72 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 LINC01551Q86U37 167 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 RPP21Q9H633 154 aaKnown RBP14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 JPT2Q9H910 190 aa14.53□□□□□ -0.08
SMARCB1-202ENST00000344921 CIDEAO60543 219 aa14.52□□□□□ -0.08
SMARCB1-202ENST00000344921 OR5AL1P0C617 328 aa14.52□□□□□ -0.08
SMARCB1-202ENST00000344921 SOHLH1Q5JUK2 328 aa14.52□□□□□ -0.08
SMARCB1-202ENST00000344921 FER1L6-AS1Q8NA97 138 aa14.52□□□□□ -0.08
SMARCB1-202ENST00000344921 OR10AG1Q8NH19 301 aa14.52□□□□□ -0.08
SMARCB1-202ENST00000344921 SNAI2O43623 268 aa14.52□□□□□ -0.09
SMARCB1-202ENST00000344921 SSBP4Q9BWG4 385 aaPredicted RBP14.52□□□□□ -0.09
SMARCB1-202ENST00000344921 GATCO43716 136 aaKnown RBP14.51□□□□□ -0.09
SMARCB1-202ENST00000344921 FAM74A4Q5TZK3 123 aa14.51□□□□□ -0.09
SMARCB1-202ENST00000344921 NAT8Q9UHE5 227 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms