RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 IGF1P05019 195 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 DDTP30046 118 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 U3KQE9 123 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 TMEM238C9JI98 176 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 LINC01006Q8NI28 216 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 TMEM141Q96I45 108 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 CENPEQ02224 2701 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 DEFB4AO15263 64 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 SNAI2O43623 268 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 IGLV2-14P01704 120 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
SMARCA4-201ENST00000344626 SDHAF1A6NFY7 115 aa12.66□□□□□ -0.38
SMARCA4-201ENST00000344626 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
SMARCA4-201ENST00000344626 TRAV2A0A0B4J234 112 aa12.66□□□□□ -0.38
SMARCA4-201ENST00000344626 ATRQ13535 2644 aa12.66□□□□□ -0.38
SMARCA4-201ENST00000344626 SH2D6Q7Z4S9 175 aa12.66□□□□□ -0.38
SMARCA4-201ENST00000344626 DMRT1Q9Y5R6 373 aa12.66□□□□□ -0.38
SMARCA4-201ENST00000344626 ATP5G1P05496 136 aa12.65□□□□□ -0.38
SMARCA4-201ENST00000344626 Q8N8P6 123 aa12.65□□□□□ -0.38
SMARCA4-201ENST00000344626 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
SMARCA4-201ENST00000344626 CHD7Q9P2D1 2997 aa12.65□□□□□ -0.38
SMARCA4-201ENST00000344626 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.39
SMARCA4-201ENST00000344626 COLCA2A8K830 154 aa12.65□□□□□ -0.39
SMARCA4-201ENST00000344626 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 JPT2Q9H910 190 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 AVPP01185 164 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 EBI3Q14213 229 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 IL17DQ8TAD2 202 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 TP53TG1Q9Y2A0 90 aa12.64□□□□□ -0.39
SMARCA4-201ENST00000344626 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 TRBV12-3P01733 135 aa12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 FANCD2OSQ96PS1 177 aa12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 PRB2P02812 416 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 GAGE6Q13070 117 aa12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
SMARCA4-201ENST00000344626 DEFB125Q8N687 156 aa12.62□□□□□ -0.39
SMARCA4-201ENST00000344626 SMIM27A0A1W2PRY6 76 aa12.62□□□□□ -0.39
SMARCA4-201ENST00000344626 A8MWP6 167 aa12.62□□□□□ -0.39
SMARCA4-201ENST00000344626 V9GYV3 84 aa12.62□□□□□ -0.39
SMARCA4-201ENST00000344626 USP24Q9UPU5 2620 aa12.62□□□□□ -0.39
SMARCA4-201ENST00000344626 GNRH2O43555 120 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 C2orf66Q6UXQ4 117 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 CCL18P55774 89 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 MRPL23Q16540 153 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 CTAG1AP78358 180 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 MRPL51Q4U2R6 128 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 C10orf99Q6UWK7 81 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 PATE2Q6UY27 113 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 CST9LQ9H4G1 147 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 KLK5Q9Y337 293 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 ICOSQ9Y6W8 199 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 UTF1Q5T230 341 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 C20orf144Q9BQM9 153 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
SMARCA4-201ENST00000344626 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
SMARCA4-201ENST00000344626 E7EUB6 86 aa12.6□□□□□ -0.39
SMARCA4-201ENST00000344626 LY6LH3BQJ8 138 aa12.6□□□□□ -0.39
SMARCA4-201ENST00000344626 KLF5Q13887 457 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-201ENST00000344626 LGALS9O00182 355 aa12.6□□□□□ -0.39
SMARCA4-201ENST00000344626 PRIMA1Q86XR5 153 aa12.6□□□□□ -0.39
SMARCA4-201ENST00000344626 EML5Q05BV3 1969 aa12.59□□□□□ -0.39
SMARCA4-201ENST00000344626 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
SMARCA4-201ENST00000344626 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
SMARCA4-201ENST00000344626 ANGP03950 147 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-201ENST00000344626 Q9HAA7 133 aa12.59□□□□□ -0.39
SMARCA4-201ENST00000344626 A0A087X0K7 114 aa12.59□□□□□ -0.39
SMARCA4-201ENST00000344626 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.58□□□□□ -0.39
SMARCA4-201ENST00000344626 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.39
SMARCA4-201ENST00000344626 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-201ENST00000344626 UBE2CO00762 179 aa12.58□□□□□ -0.4
SMARCA4-201ENST00000344626 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
SMARCA4-201ENST00000344626 DNAJC30Q96LL9 226 aa12.58□□□□□ -0.4
SMARCA4-201ENST00000344626 PMVKQ15126 192 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 HIST1H2BLQ99880 126 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 IGLL5B9A064 214 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 HTTP42858 3142 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 C9JQL5 133 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 Q0VG73 95 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 SMIM2Q9BVW6 85 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 PKIGQ9Y2B9 76 aa12.57□□□□□ -0.4
SMARCA4-201ENST00000344626 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 LINC00518Q8N0U6 118 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 CCDC140Q96MF4 163 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 TYMSP04818 313 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 HIST3H2BBQ8N257 126 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 SYS1-DBNDD2H3BUS1 97 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
SMARCA4-201ENST00000344626 LEPROTO15243 131 aa12.55□□□□□ -0.4
SMARCA4-201ENST00000344626 PAX2Q02962 417 aa12.55□□□□□ -0.4
SMARCA4-201ENST00000344626 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
SMARCA4-201ENST00000344626 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 K7ERU9 68 aa12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 SIGLEC8Q9NYZ4 499 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms