RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 PNRC1Q12796 327 aaPredicted RBP13.31□□□□□ -0.28
CDHR4-201ENST00000343366 C12orf74Q32Q52 190 aa13.31□□□□□ -0.28
CDHR4-201ENST00000343366 RASL10AQ92737 203 aa13.31□□□□□ -0.28
CDHR4-201ENST00000343366 VPS13DQ5THJ4 4388 aa13.31□□□□□ -0.28
CDHR4-201ENST00000343366 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 CIDEAO60543 219 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 RNASE3P12724 160 aaKnown RBP13.3□□□□□ -0.28
CDHR4-201ENST00000343366 NANOS2P60321 138 aaKnown RBP13.3□□□□□ -0.28
CDHR4-201ENST00000343366 ERVFC1-1P60608 527 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 C15orf54Q8N8G6 183 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 NUDT10Q8NFP7 164 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 OR2D3Q8NGH3 330 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 NUDT11Q96G61 164 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 OSTCQ9NRP0 149 aa13.3□□□□□ -0.28
CDHR4-201ENST00000343366 A0A1W2PPQ1 181 aa13.29□□□□□ -0.28
CDHR4-201ENST00000343366 ATP5G1P05496 136 aa13.29□□□□□ -0.28
CDHR4-201ENST00000343366 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
CDHR4-201ENST00000343366 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
CDHR4-201ENST00000343366 CT83Q5H943 113 aa13.29□□□□□ -0.28
CDHR4-201ENST00000343366 SYT8Q8NBV8 401 aa13.29□□□□□ -0.28
CDHR4-201ENST00000343366 RPP21Q9H633 154 aaKnown RBP13.29□□□□□ -0.28
CDHR4-201ENST00000343366 TRGV2A0A075B6R0 118 aa13.28□□□□□ -0.28
CDHR4-201ENST00000343366 GATCO43716 136 aaKnown RBP13.28□□□□□ -0.28
CDHR4-201ENST00000343366 OR5AL1P0C617 328 aa13.28□□□□□ -0.28
CDHR4-201ENST00000343366 RPL23P62829 140 aaKnown RBP13.28□□□□□ -0.28
CDHR4-201ENST00000343366 PHLDA3Q9Y5J5 127 aa13.28□□□□□ -0.28
CDHR4-201ENST00000343366 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 GAGE12BA1L429 117 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 TMEM218A2RU14 115 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 A8MWL6 223 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 F2Z2F3 143 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 GAGE7O76087 117 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 ARMS2P0C7Q2 107 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 GAGE12FP0CL80 117 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 GAGE12GP0CL81 117 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 GAGE12IP0CL82 117 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 ADIRFQ15847 76 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 ZNF876PQ49A33 203 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 Q6ZTC4 211 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 Q6ZTI0 123 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 PHLDA1Q8WV24 401 aaPredicted RBP13.27□□□□□ -0.29
CDHR4-201ENST00000343366 ISOC2Q96AB3 205 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 SSBP4Q9BWG4 385 aaPredicted RBP13.27□□□□□ -0.29
CDHR4-201ENST00000343366 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.29
CDHR4-201ENST00000343366 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.29
CDHR4-201ENST00000343366 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
CDHR4-201ENST00000343366 GRIFINA4D1Z8 144 aa13.26□□□□□ -0.29
CDHR4-201ENST00000343366 H3BVH4 76 aa13.26□□□□□ -0.29
CDHR4-201ENST00000343366 SNAI2O43623 268 aa13.26□□□□□ -0.29
CDHR4-201ENST00000343366 RPL19P84098 196 aaKnown RBP13.26□□□□□ -0.29
CDHR4-201ENST00000343366 ZFP82Q8N141 532 aa13.26□□□□□ -0.29
CDHR4-201ENST00000343366 SFRP2Q96HF1 295 aa13.26□□□□□ -0.29
CDHR4-201ENST00000343366 SEC11CQ9BY50 192 aa13.26□□□□□ -0.29
CDHR4-201ENST00000343366 DEFB131BA0A096LNP1 70 aa13.25□□□□□ -0.29
CDHR4-201ENST00000343366 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
CDHR4-201ENST00000343366 SLAQ13239 276 aa13.25□□□□□ -0.29
CDHR4-201ENST00000343366 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
CDHR4-201ENST00000343366 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
CDHR4-201ENST00000343366 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
CDHR4-201ENST00000343366 MRPL16Q9NX20 251 aaKnown RBP13.25□□□□□ -0.29
CDHR4-201ENST00000343366 TRAV4A0A0B4J268 109 aa13.24□□□□□ -0.29
CDHR4-201ENST00000343366 A8MWV9 139 aa13.24□□□□□ -0.29
CDHR4-201ENST00000343366 F8W036 122 aa13.24□□□□□ -0.29
CDHR4-201ENST00000343366 TCTAP57738 103 aa13.24□□□□□ -0.29
CDHR4-201ENST00000343366 CEMP1Q6PRD7 247 aaPredicted RBP13.24□□□□□ -0.29
CDHR4-201ENST00000343366 PPP1R2P9O14990 202 aa13.23□□□□□ -0.29
CDHR4-201ENST00000343366 CACNG7P62955 275 aa13.23□□□□□ -0.29
CDHR4-201ENST00000343366 WDR73Q6P4I2 378 aa13.23□□□□□ -0.29
CDHR4-201ENST00000343366 OR10G8Q8NGN5 311 aa13.23□□□□□ -0.29
CDHR4-201ENST00000343366 DNAH6Q9C0G6 4158 aa13.22□□□□□ -0.29
CDHR4-201ENST00000343366 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
CDHR4-201ENST00000343366 NDUFA5Q16718 116 aa13.22□□□□□ -0.29
CDHR4-201ENST00000343366 SPANXN1Q5VSR9 72 aa13.22□□□□□ -0.29
CDHR4-201ENST00000343366 MUC4Q99102 2169 aa13.21□□□□□ -0.29
CDHR4-201ENST00000343366 FOXA3P55318 350 aaPredicted RBP13.21□□□□□ -0.29
CDHR4-201ENST00000343366 OR4C5Q8NGB2 326 aa13.21□□□□□ -0.29
CDHR4-201ENST00000343366 TSKUQ8WUA8 353 aa13.21□□□□□ -0.29
CDHR4-201ENST00000343366 NXPH4O95158 308 aa13.2□□□□□ -0.3
CDHR4-201ENST00000343366 ZFP2Q6ZN57 461 aa13.2□□□□□ -0.3
CDHR4-201ENST00000343366 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
CDHR4-201ENST00000343366 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 F5H768 121 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 H3BNG1 76 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 RHODO00212 210 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 RS1O15537 224 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 LY6G6CO95867 125 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 MT-ND4LP03901 98 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 CTRLP40313 264 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 BORCS7Q96B45 105 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 V9GYV3 84 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 PKHD1P08F94 4074 aa13.19□□□□□ -0.3
CDHR4-201ENST00000343366 M0R381 172 aa13.18□□□□□ -0.3
CDHR4-201ENST00000343366 HTN3P15516 51 aa13.18□□□□□ -0.3
CDHR4-201ENST00000343366 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
CDHR4-201ENST00000343366 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
CDHR4-201ENST00000343366 CNFNQ9BYD5 112 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms