RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 IGLV3-32A0A0A0MS00 114 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 LGALS9O00182 355 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 IGLC7A0M8Q6 106 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 Q6ZUT4 128 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 C20orf173Q96LM9 149 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 DKK2Q9UBU2 259 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 C15orf62A8K5M9 175 aa14.09□□□□□ -0.15
SMAD4-201ENST00000342988 FAM231DQ6ZW35 169 aa14.08□□□□□ -0.15
SMAD4-201ENST00000342988 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.16
SMAD4-201ENST00000342988 PRR25Q96S07 402 aa14.08□□□□□ -0.16
SMAD4-201ENST00000342988 RBAKDNA6NC62 111 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 BPY2O14599 106 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 NDUFS7O75251 213 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 MYO18BQ8IUG5 2567 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 C11orf52Q96A22 123 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 KLK5Q9Y337 293 aaPredicted RBP14.07□□□□□ -0.16
SMAD4-201ENST00000342988 AMTNQ6UX39 209 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 IGKV1D-43A0A0B4J1Z2 117 aa14.07□□□□□ -0.16
SMAD4-201ENST00000342988 FOXF2Q12947 444 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 A0A096LPF7 62 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 IGHV1-69DA0A0B4J2H0 117 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 A0A0U1RQV1 116 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 IGFL4Q6B9Z1 124 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 Q71RC1 249 aaPredicted RBP14.06□□□□□ -0.16
SMAD4-201ENST00000342988 RNASE13Q5GAN3 156 aaKnown RBP14.06□□□□□ -0.16
SMAD4-201ENST00000342988 FAM236DA0A1B0GTK5 79 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 FAM236CP0DP71 79 aa14.06□□□□□ -0.16
SMAD4-201ENST00000342988 ATP5EP2Q5VTU8 51 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 Q6ZQT7 251 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 Q6ZS49 121 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 LHFPL1Q86WI0 220 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 IGLL1P15814 213 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 ATP6V0E2Q8NHE4 81 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 WIPF2Q8TF74 440 aaPredicted RBP14.05□□□□□ -0.16
SMAD4-201ENST00000342988 PRDM6Q9NQX0 595 aa14.05□□□□□ -0.16
SMAD4-201ENST00000342988 K7EQD1 137 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 LENEPQ9Y5L5 61 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 COL18A1P39060 1754 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 ATP6V0E1O15342 81 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 ZNF837Q96EG3 531 aaPredicted RBP14.04□□□□□ -0.16
SMAD4-201ENST00000342988 IGKV1-9A0A0C4DH69 117 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 SPART-AS1P0CW21 52 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 LINC00479Q96M42 142 aa14.04□□□□□ -0.16
SMAD4-201ENST00000342988 A0A1B0GUS0 222 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 UQCRQO14949 82 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 SPACA3Q8IXA5 215 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 GAFA1Q96PS6 74 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 GYPEP15421 78 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 PRR31Q5SQ13 230 aa14.03□□□□□ -0.16
SMAD4-201ENST00000342988 FGF23Q9GZV9 251 aaPredicted RBP14.02□□□□□ -0.16
SMAD4-201ENST00000342988 CYTL1Q9NRR1 136 aa14.02□□□□□ -0.16
SMAD4-201ENST00000342988 CCL25O15444 150 aa14.02□□□□□ -0.16
SMAD4-201ENST00000342988 H3BT86 120 aa14.02□□□□□ -0.17
SMAD4-201ENST00000342988 CD177Q8N6Q3 437 aa14.02□□□□□ -0.17
SMAD4-201ENST00000342988 H3BUA1 57 aa14.02□□□□□ -0.17
SMAD4-201ENST00000342988 CRYGSP22914 178 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 C5orf24Q7Z6I8 188 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 IL17DQ8TAD2 202 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 IGHV7-4-1A0A0J9YVY3 117 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 LINC00473A8K010 186 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 VOPP1Q96AW1 172 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 NDUFA4L2Q9NRX3 87 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.01□□□□□ -0.17
SMAD4-201ENST00000342988 IGKV2-29A2NJV5 120 aaPredicted RBP14.01□□□□□ -0.17
SMAD4-201ENST00000342988 TEX36Q5VZQ5 186 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 BPESC1Q9GZL8 116 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 FOXI1Q12951 378 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 IGHV2-70P01814 119 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 LY6DQ14210 128 aa14.01□□□□□ -0.17
SMAD4-201ENST00000342988 WI2-2373I1.2A0A1W2PRP0 233 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 IGKV1-16P04430 117 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 A4D1N5 150 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 IGHV1-69P01742 117 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 TRAV23DV6A0A075B6W5 121 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 H3BRN7 92 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 C1QCP02747 245 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 C5orf38Q86SI9 138 aa14□□□□□ -0.17
SMAD4-201ENST00000342988 LMO1P25800 156 aa13.99□□□□□ -0.17
SMAD4-201ENST00000342988 TRBV7-3A0A075B6L6 115 aa13.99□□□□□ -0.17
SMAD4-201ENST00000342988 C4orf51C9J302 202 aa13.99□□□□□ -0.17
SMAD4-201ENST00000342988 ZC2HC1AQ96GY0 325 aa13.99□□□□□ -0.17
SMAD4-201ENST00000342988 LINC00643Q86TS7 51 aa13.99□□□□□ -0.17
SMAD4-201ENST00000342988 V9GYV3 84 aa13.99□□□□□ -0.17
SMAD4-201ENST00000342988 PAQR4Q8N4S7 273 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-201ENST00000342988 TFF1P04155 84 aa13.98□□□□□ -0.17
SMAD4-201ENST00000342988 VPREB1P12018 145 aa13.98□□□□□ -0.17
SMAD4-201ENST00000342988 COLQQ9Y215 455 aaPredicted RBP13.97□□□□□ -0.17
SMAD4-201ENST00000342988 J3QRE1 110 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 A0A0G2JNJ9 132 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 Q9UFV3 132 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 A0A0J9YY99 117 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 REG4Q9BYZ8 158 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 IGLV3-12A0A075B6K2 115 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 COX7BP24311 80 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 WDR90Q96KV7 1748 aa13.97□□□□□ -0.17
SMAD4-201ENST00000342988 CCL24O00175 119 aa13.96□□□□□ -0.17
SMAD4-201ENST00000342988 GPHB5Q86YW7 130 aa13.96□□□□□ -0.17
SMAD4-201ENST00000342988 IGHV2-70DA0A0C4DH43 119 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms