RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
PBX3-201ENST00000342287 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
PBX3-201ENST00000342287 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
PBX3-201ENST00000342287 ZNF491Q8N8L2 437 aa11.29□□□□□ -0.6
PBX3-201ENST00000342287 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
PBX3-201ENST00000342287 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
PBX3-201ENST00000342287 CTSGP08311 255 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
PBX3-201ENST00000342287 WI2-2373I1.2A0A1W2PRP0 233 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 PSMB2P49721 201 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
PBX3-201ENST00000342287 CREBBPQ92793 2442 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 A0A096LNJ9 63 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 IL4P05112 153 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 PYYP10082 97 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
PBX3-201ENST00000342287 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 Q6ZS46 218 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 RPP21Q9H633 154 aaKnown RBP11.27□□□□□ -0.61
PBX3-201ENST00000342287 ZANQ9Y493 2812 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 FAM223BA6NKX1 122 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 CRLF1O75462 422 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 FXYD5Q96DB9 178 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
PBX3-201ENST00000342287 GCN1Q92616 2671 aaKnown RBP11.27□□□□□ -0.61
PBX3-201ENST00000342287 H3BUA1 57 aa11.26□□□□□ -0.61
PBX3-201ENST00000342287 WIPF1O43516 503 aa11.26□□□□□ -0.61
PBX3-201ENST00000342287 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
PBX3-201ENST00000342287 LINC00322Q6ZN03 302 aaPredicted RBP11.26□□□□□ -0.61
PBX3-201ENST00000342287 PDZD2O15018 2839 aa11.26□□□□□ -0.61
PBX3-201ENST00000342287 TRGV3P03979 118 aa11.26□□□□□ -0.61
PBX3-201ENST00000342287 GNG5P63218 68 aa11.26□□□□□ -0.61
PBX3-201ENST00000342287 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
PBX3-201ENST00000342287 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
PBX3-201ENST00000342287 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
PBX3-201ENST00000342287 ZFHX3Q15911 3703 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 LOC107984156A0A0G2JMH3 177 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 TMEM262E9PQX1 116 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 PEX7O00628 323 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 P01737 135 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 ARL17AQ8IVW1 177 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 HIST1H4GQ99525 98 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 H3BVH4 76 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
PBX3-201ENST00000342287 IFI27L1Q96BM0 104 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
PBX3-201ENST00000342287 HOXA3O43365 443 aaPredicted RBP11.24□□□□□ -0.61
PBX3-201ENST00000342287 CLEC19AQ6UXS0 136 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 GTSCR1Q86UQ5 136 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 UNC79Q9P2D8 2635 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 H3BRN7 92 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 GP9P14770 177 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 Q6ZQT7 251 aa11.24□□□□□ -0.61
PBX3-201ENST00000342287 USMG5Q96IX5 58 aa11.23□□□□□ -0.61
PBX3-201ENST00000342287 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
PBX3-201ENST00000342287 ITPR3Q14573 2671 aa11.23□□□□□ -0.61
PBX3-201ENST00000342287 TEX15Q9BXT5 2789 aa11.23□□□□□ -0.61
PBX3-201ENST00000342287 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 RASL10AQ92737 203 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 CCDC168Q8NDH2 2452 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 CFHR3Q02985 330 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 PRSS22Q9GZN4 317 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
PBX3-201ENST00000342287 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.61
PBX3-201ENST00000342287 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.62
PBX3-201ENST00000342287 ZNF329Q86UD4 541 aa11.21□□□□□ -0.62
PBX3-201ENST00000342287 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.62
PBX3-201ENST00000342287 ITPR2Q14571 2701 aa11.2□□□□□ -0.62
PBX3-201ENST00000342287 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
PBX3-201ENST00000342287 MYCNOSP40205 109 aa11.2□□□□□ -0.62
PBX3-201ENST00000342287 KRTAP1-1Q07627 177 aa11.2□□□□□ -0.62
PBX3-201ENST00000342287 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
PBX3-201ENST00000342287 KLK15Q9H2R5 256 aa11.2□□□□□ -0.62
PBX3-201ENST00000342287 HBDP02042 147 aa11.2□□□□□ -0.62
PBX3-201ENST00000342287 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
PBX3-201ENST00000342287 PGPA6NDG6 321 aa11.19□□□□□ -0.62
PBX3-201ENST00000342287 MAPKAPK5-AS1Q8N8E1 139 aa11.19□□□□□ -0.62
PBX3-201ENST00000342287 ZFAND3Q9H8U3 227 aa11.19□□□□□ -0.62
PBX3-201ENST00000342287 A8MWV9 139 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 IGHG4P01861 327 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 TMEM86BQ8N661 226 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 HHLA3Q9XRX5 114 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 ZNF469Q96JG9 3925 aaPredicted RBP11.18□□□□□ -0.62
PBX3-201ENST00000342287 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 H3BTX0 84 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 HAX1O00165 279 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms