RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 K7ERJ3 54 aa10.02□□□□□ -0.81
COL18A1-201ENST00000342220 SMIM13P0DJ93 91 aa10.02□□□□□ -0.81
COL18A1-201ENST00000342220 RPL7P18124 248 aaKnown RBP10.02□□□□□ -0.81
COL18A1-201ENST00000342220 GCSHP23434 173 aa10.02□□□□□ -0.81
COL18A1-201ENST00000342220 FAM162BQ5T6X4 162 aa10.02□□□□□ -0.81
COL18A1-201ENST00000342220 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.81
COL18A1-201ENST00000342220 J3QLI3 93 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 ARMS2P0C7Q2 107 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 KRTAP1-3Q8IUG1 177 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 HTN1P15515 57 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 GAGE5Q13069 117 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 GAGE6Q13070 117 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 NDFIP1Q9BT67 221 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 TRBV19A0A075B6N1 114 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 MT-ATP8P03928 68 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
COL18A1-201ENST00000342220 ANXA2RQ3ZCQ2 193 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 CR1P17927 2039 aa10.01□□□□□ -0.81
COL18A1-201ENST00000342220 F6UB75 175 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 ERG28Q9UKR5 140 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 H3BMG7 143 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 H3BRN7 92 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 FAM110AQ9BQ89 295 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 SIGLEC15Q6ZMC9 328 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 SYT8Q8NBV8 401 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 CITED1Q99966 193 aa10□□□□□ -0.81
COL18A1-201ENST00000342220 A0A1B0GUT8 65 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 INAFM1C9JVW0 142 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 NMUP48645 174 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 TRBV7-1A0A0A6YYK4 115 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 K7EMI3 77 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 SPRY2O43597 315 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 NCR2O95944 276 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 OR5AL1P0C617 328 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 CT45A10P0DMU9 189 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 CRIP1P50238 77 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
COL18A1-201ENST00000342220 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 PRAC2D3DTV9 90 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 FGF6P10767 208 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 ID1P41134 155 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 NSUN5P1Q3KNT7 163 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 LRRC75A-AS1Q8N1F1 130 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 KLHL30-AS1Q8NEE0 82 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 C18orf15Q96N68 181 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 C8orf49Q96NF6 230 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 AGRNO00468 2067 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
COL18A1-201ENST00000342220 Q6YL49 198 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 ORM1P02763 201 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 SLURP1P55000 103 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 OR8A1Q8NGG7 326 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 ZNF414Q96IQ9 312 aa9.98□□□□□ -0.81
COL18A1-201ENST00000342220 ZNF688P0C7X2 276 aa9.97□□□□□ -0.81
COL18A1-201ENST00000342220 FAM106AQ4KMX7 169 aa9.97□□□□□ -0.81
COL18A1-201ENST00000342220 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
COL18A1-201ENST00000342220 F8W1H4 67 aa9.97□□□□□ -0.81
COL18A1-201ENST00000342220 A0A1B0GWB2 263 aa9.97□□□□□ -0.81
COL18A1-201ENST00000342220 RIGQ13278 110 aa9.97□□□□□ -0.81
COL18A1-201ENST00000342220 TRBV6-1A0A0K0K1D8 114 aa9.96□□□□□ -0.81
COL18A1-201ENST00000342220 MRPS12O15235 138 aaKnown RBP9.96□□□□□ -0.81
COL18A1-201ENST00000342220 PCP2Q8IVA1 136 aa9.96□□□□□ -0.81
COL18A1-201ENST00000342220 ESM1Q9NQ30 184 aa9.96□□□□□ -0.81
COL18A1-201ENST00000342220 NHP2Q9NX24 153 aaKnown RBP9.96□□□□□ -0.81
COL18A1-201ENST00000342220 WI2-2373I1.2A0A1W2PRP0 233 aa9.96□□□□□ -0.82
COL18A1-201ENST00000342220 FXYD2P54710 66 aa9.96□□□□□ -0.82
COL18A1-201ENST00000342220 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.82
COL18A1-201ENST00000342220 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 A0A087WW49 117 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 FAM223BA6NKX1 122 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 BUB3O43684 328 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 LY6G6DO95868 133 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 FAM223AQ8IWN6 122 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 APOMO95445 188 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 IGF1P05019 195 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 AP5S1Q9NUS5 200 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 SMAD5-AS1Q9Y6J3 95 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 STAB1Q9NY15 2570 aa9.95□□□□□ -0.82
COL18A1-201ENST00000342220 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 OR9G4Q8NGQ1 327 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 COL6A5A8TX70 2615 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 TMEM213A2RRL7 107 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 ZNF702PQ9H963 129 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 XGP55808 180 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 FXYD7P58549 80 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
COL18A1-201ENST00000342220 LYZL1Q6UWQ5 148 aa9.93□□□□□ -0.82
COL18A1-201ENST00000342220 USMG5Q96IX5 58 aa9.93□□□□□ -0.82
COL18A1-201ENST00000342220 TNFRSF18Q9Y5U5 241 aa9.93□□□□□ -0.82
COL18A1-201ENST00000342220 NBEAL2Q6ZNJ1 2754 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms