RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
COL11A2-201ENST00000341947 COX7B2Q8TF08 81 aa11.84□□□□□ -0.51
COL11A2-201ENST00000341947 NTN5Q8WTR8 489 aaPredicted RBP11.84□□□□□ -0.51
COL11A2-201ENST00000341947 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
COL11A2-201ENST00000341947 ADORA2A-AS1P86434 159 aa11.84□□□□□ -0.51
COL11A2-201ENST00000341947 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
COL11A2-201ENST00000341947 ARFGEF3Q5TH69 2177 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 K7EIM0 57 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 NDUFA1O15239 70 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 GATA1P15976 413 aaPredicted RBP11.83□□□□□ -0.52
COL11A2-201ENST00000341947 LINC01545Q5VT33 79 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 NRGNQ92686 78 aa11.83□□□□□ -0.52
COL11A2-201ENST00000341947 C4orf48Q5BLP8 95 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 HHLA3Q9XRX5 114 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 C2orf70A6NJV1 201 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 ZFP2Q6ZN57 461 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 Q8NFD4 153 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 RITA1Q96K30 269 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 SND1-IT1Q9HBX3 110 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
COL11A2-201ENST00000341947 C10orf91Q5T1B1 145 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 CACNA1BQ00975 2339 aa11.82□□□□□ -0.52
COL11A2-201ENST00000341947 CTSGP08311 255 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 RS1O15537 224 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 Q8N9W7 124 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 TMEM258P61165 79 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 MGAMO43451 1857 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 GVINP1Q7Z2Y8 2422 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 H0YGX0 51 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 H3BQ85 93 aa11.81□□□□□ -0.52
COL11A2-201ENST00000341947 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
COL11A2-201ENST00000341947 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
COL11A2-201ENST00000341947 PI4KAP42356 2102 aa11.8□□□□□ -0.52
COL11A2-201ENST00000341947 OPRPNQ99935 248 aaPredicted RBP11.8□□□□□ -0.52
COL11A2-201ENST00000341947 NCR3O14931 201 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 RBM3P98179 157 aaKnown RBP11.79□□□□□ -0.52
COL11A2-201ENST00000341947 CLPSL1A2RUU4 121 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 DEFB135Q30KP9 77 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 FANCD2OSQ96PS1 177 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 K7EMT4 169 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
COL11A2-201ENST00000341947 TMEM89A2RUT3 159 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 IGHG2P01859 326 aa11.79□□□□□ -0.52
COL11A2-201ENST00000341947 TRBV7-3A0A075B6L6 115 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 Q8N1Y9 231 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 ACYP1P07311 99 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 MAJINQ3KP22 176 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 IGLL5B9A064 214 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
COL11A2-201ENST00000341947 IL15RAQ13261 267 aa11.77□□□□□ -0.52
COL11A2-201ENST00000341947 A0A0J9YXV3 536 aa11.77□□□□□ -0.52
COL11A2-201ENST00000341947 CITED1Q99966 193 aa11.77□□□□□ -0.52
COL11A2-201ENST00000341947 PCP2Q8IVA1 136 aa11.77□□□□□ -0.53
COL11A2-201ENST00000341947 FGF23Q9GZV9 251 aaPredicted RBP11.77□□□□□ -0.53
COL11A2-201ENST00000341947 WI2-2373I1.2A0A1W2PRP0 233 aa11.77□□□□□ -0.53
COL11A2-201ENST00000341947 IGKV1-17P01599 117 aa11.77□□□□□ -0.53
COL11A2-201ENST00000341947 ACACAQ13085 2346 aa11.77□□□□□ -0.53
COL11A2-201ENST00000341947 ABCA4P78363 2273 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 CXCL5P42830 114 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 IL17DQ8TAD2 202 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 Q6ZVH6 145 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 DEFB4AO15263 64 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 GPHB5Q86YW7 130 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 MUSTN1Q8IVN3 82 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 MP68P56378 58 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 POLEQ07864 2286 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 PLXNA2O75051 1894 aa11.76□□□□□ -0.53
COL11A2-201ENST00000341947 TSC2P49815 1807 aa11.75□□□□□ -0.53
COL11A2-201ENST00000341947 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
COL11A2-201ENST00000341947 ZFP36P26651 326 aaKnown RBP11.75□□□□□ -0.53
COL11A2-201ENST00000341947 INSL3P51460 131 aa11.75□□□□□ -0.53
COL11A2-201ENST00000341947 NREPQ16612 68 aa11.75□□□□□ -0.53
COL11A2-201ENST00000341947 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
COL11A2-201ENST00000341947 SPAG11BQ08648 103 aa11.74□□□□□ -0.53
COL11A2-201ENST00000341947 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 DIDO1Q9BTC0 2240 aaKnown RBP11.73□□□□□ -0.53
COL11A2-201ENST00000341947 DOPEY2Q9Y3R5 2298 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 MED14OSP0DP75 135 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 SPTBN1Q01082 2364 aaKnown RBP11.73□□□□□ -0.53
COL11A2-201ENST00000341947 NPSP0C0P6 89 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 A0A1B0GX51 115 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 SEM1Q6ZVN7 128 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 KLK12Q9UKR0 248 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 TANC1Q9C0D5 1861 aa11.73□□□□□ -0.53
COL11A2-201ENST00000341947 Q8N7P7 452 aa11.72□□□□□ -0.53
COL11A2-201ENST00000341947 WFDC9Q8NEX5 89 aa11.72□□□□□ -0.53
COL11A2-201ENST00000341947 PRAC2D3DTV9 90 aa11.72□□□□□ -0.53
COL11A2-201ENST00000341947 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
COL11A2-201ENST00000341947 TEX22C9J3V5 150 aa11.72□□□□□ -0.53
COL11A2-201ENST00000341947 RNF138Q8WVD3 245 aa11.72□□□□□ -0.53
COL11A2-201ENST00000341947 SPTBN2O15020 2390 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms