RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
RET-201ENST00000340058 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
RET-201ENST00000340058 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
RET-201ENST00000340058 A0A1W2PPR1 153 aa11.35□□□□□ -0.59
RET-201ENST00000340058 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
RET-201ENST00000340058 RPL39LQ96EH5 51 aaKnown RBP11.35□□□□□ -0.59
RET-201ENST00000340058 ADARB2-AS1A8MUL3 147 aa11.34□□□□□ -0.59
RET-201ENST00000340058 H3BRM9 83 aa11.34□□□□□ -0.59
RET-201ENST00000340058 HSD52Q0P140 79 aa11.34□□□□□ -0.59
RET-201ENST00000340058 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
RET-201ENST00000340058 PRORYQ9H606 182 aa11.34□□□□□ -0.59
RET-201ENST00000340058 A0A096LPF7 62 aa11.34□□□□□ -0.59
RET-201ENST00000340058 TMEM190Q8WZ59 177 aa11.34□□□□□ -0.59
RET-201ENST00000340058 TTTY13Q9BZ97 58 aa11.34□□□□□ -0.59
RET-201ENST00000340058 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.59
RET-201ENST00000340058 A0A087WW49 117 aa11.33□□□□□ -0.59
RET-201ENST00000340058 ELANEP08246 267 aa11.33□□□□□ -0.59
RET-201ENST00000340058 J3QLI3 93 aa11.33□□□□□ -0.6
RET-201ENST00000340058 SMIM2Q9BVW6 85 aa11.33□□□□□ -0.6
RET-201ENST00000340058 WI2-2373I1.2A0A1W2PRP0 233 aa11.33□□□□□ -0.6
RET-201ENST00000340058 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
RET-201ENST00000340058 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
RET-201ENST00000340058 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
RET-201ENST00000340058 A0A087WX48 190 aa11.32□□□□□ -0.6
RET-201ENST00000340058 KIR3DS1Q14943 382 aa11.32□□□□□ -0.6
RET-201ENST00000340058 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
RET-201ENST00000340058 DSPP15924 2871 aaKnown RBP11.32□□□□□ -0.6
RET-201ENST00000340058 DLEU1O43261 78 aa11.32□□□□□ -0.6
RET-201ENST00000340058 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
RET-201ENST00000340058 FREM2Q5SZK8 3169 aa11.32□□□□□ -0.6
RET-201ENST00000340058 IGF1P05019 195 aa11.32□□□□□ -0.6
RET-201ENST00000340058 TEX43Q6ZNM6 134 aa11.32□□□□□ -0.6
RET-201ENST00000340058 Q8N8P6 123 aa11.32□□□□□ -0.6
RET-201ENST00000340058 SAMD5Q5TGI4 173 aa11.31□□□□□ -0.6
RET-201ENST00000340058 ZNF747Q9BV97 191 aa11.31□□□□□ -0.6
RET-201ENST00000340058 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
RET-201ENST00000340058 A0A1B0GV72 72 aa11.31□□□□□ -0.6
RET-201ENST00000340058 ODF3BA8MYP8 253 aa11.31□□□□□ -0.6
RET-201ENST00000340058 JPT2Q9H910 190 aa11.31□□□□□ -0.6
RET-201ENST00000340058 COL6A3P12111 3177 aa11.31□□□□□ -0.6
RET-201ENST00000340058 EYSQ5T1H1 3165 aa11.3□□□□□ -0.6
RET-201ENST00000340058 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
RET-201ENST00000340058 CHAC1Q9BUX1 264 aa11.3□□□□□ -0.6
RET-201ENST00000340058 K7EMI3 77 aa11.3□□□□□ -0.6
RET-201ENST00000340058 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
RET-201ENST00000340058 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
RET-201ENST00000340058 KLF12Q9Y4X4 402 aa11.3□□□□□ -0.6
RET-201ENST00000340058 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
RET-201ENST00000340058 GDF5OSQ5U4N7 250 aa11.3□□□□□ -0.6
RET-201ENST00000340058 CCL24O00175 119 aa11.29□□□□□ -0.6
RET-201ENST00000340058 Q6ZS46 218 aa11.29□□□□□ -0.6
RET-201ENST00000340058 WFDC11Q8NEX6 87 aa11.29□□□□□ -0.6
RET-201ENST00000340058 IGHG2P01859 326 aa11.29□□□□□ -0.6
RET-201ENST00000340058 PLNP26678 52 aa11.29□□□□□ -0.6
RET-201ENST00000340058 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
RET-201ENST00000340058 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
RET-201ENST00000340058 ESDP10768 282 aa11.29□□□□□ -0.6
RET-201ENST00000340058 OR5A1Q8NGJ0 315 aa11.29□□□□□ -0.6
RET-201ENST00000340058 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
RET-201ENST00000340058 SEC11AP67812 179 aa11.28□□□□□ -0.6
RET-201ENST00000340058 C11orf71Q6IPW1 123 aa11.28□□□□□ -0.6
RET-201ENST00000340058 ZNF292O60281 2723 aa11.28□□□□□ -0.6
RET-201ENST00000340058 SRSF2Q01130 221 aaKnown RBP11.28□□□□□ -0.6
RET-201ENST00000340058 AZU1P20160 251 aa11.28□□□□□ -0.6
RET-201ENST00000340058 LINC00158P58513 81 aa11.28□□□□□ -0.6
RET-201ENST00000340058 LOXL1Q08397 574 aaPredicted RBP11.28□□□□□ -0.6
RET-201ENST00000340058 DPH3Q96FX2 82 aa11.28□□□□□ -0.6
RET-201ENST00000340058 NPSP0C0P6 89 aa11.27□□□□□ -0.6
RET-201ENST00000340058 TRPT1Q86TN4 253 aaKnown RBP11.27□□□□□ -0.6
RET-201ENST00000340058 RNF114Q9Y508 228 aa11.27□□□□□ -0.6
RET-201ENST00000340058 VWC2LB2RUY7 222 aa11.27□□□□□ -0.61
RET-201ENST00000340058 MALP21145 153 aa11.27□□□□□ -0.61
RET-201ENST00000340058 C3orf56Q8N813 242 aa11.27□□□□□ -0.61
RET-201ENST00000340058 TP73-AS1Q9UF72 201 aa11.27□□□□□ -0.61
RET-201ENST00000340058 CRYGBP07316 175 aa11.27□□□□□ -0.61
RET-201ENST00000340058 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
RET-201ENST00000340058 DNAL4O96015 105 aa11.26□□□□□ -0.61
RET-201ENST00000340058 ESM1Q9NQ30 184 aa11.26□□□□□ -0.61
RET-201ENST00000340058 ANKRD39Q53RE8 183 aa11.26□□□□□ -0.61
RET-201ENST00000340058 TMEM61Q8N0U2 210 aa11.26□□□□□ -0.61
RET-201ENST00000340058 PRADC1Q9BSG0 188 aa11.26□□□□□ -0.61
RET-201ENST00000340058 CPAMD8Q8IZJ3 1885 aa11.26□□□□□ -0.61
RET-201ENST00000340058 EXPH5Q8NEV8 1989 aa11.26□□□□□ -0.61
RET-201ENST00000340058 K7ERJ3 54 aa11.25□□□□□ -0.61
RET-201ENST00000340058 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
RET-201ENST00000340058 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
RET-201ENST00000340058 ATRQ13535 2644 aa11.25□□□□□ -0.61
RET-201ENST00000340058 C19orf71A6NCJ1 209 aa11.24□□□□□ -0.61
RET-201ENST00000340058 A6NDX4 124 aa11.24□□□□□ -0.61
RET-201ENST00000340058 U3KQE9 123 aa11.24□□□□□ -0.61
RET-201ENST00000340058 C2orf70A6NJV1 201 aa11.24□□□□□ -0.61
RET-201ENST00000340058 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
RET-201ENST00000340058 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
RET-201ENST00000340058 PRIMA1Q86XR5 153 aa11.24□□□□□ -0.61
RET-201ENST00000340058 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
RET-201ENST00000340058 GAGE6Q13070 117 aa11.24□□□□□ -0.61
RET-201ENST00000340058 Q8N1Y9 231 aa11.24□□□□□ -0.61
RET-201ENST00000340058 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
RET-201ENST00000340058 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
RET-201ENST00000340058 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms