RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
CCNY-202ENST00000339497 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
CCNY-202ENST00000339497 KLF12Q9Y4X4 402 aa12.44□□□□□ -0.42
CCNY-202ENST00000339497 WI2-2373I1.2A0A1W2PRP0 233 aa12.44□□□□□ -0.42
CCNY-202ENST00000339497 I3L3M4 83 aa12.44□□□□□ -0.42
CCNY-202ENST00000339497 ZNRF2Q8NHG8 242 aa12.44□□□□□ -0.42
CCNY-202ENST00000339497 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.43□□□□□ -0.42
CCNY-202ENST00000339497 GAGE7O76087 117 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 RASL10AQ92737 203 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 F8VRH5 84 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 DAZAP2Q15038 168 aaPredicted RBP12.43□□□□□ -0.42
CCNY-202ENST00000339497 ATP6V0BQ99437 205 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 LRP4O75096 1905 aa12.43□□□□□ -0.42
CCNY-202ENST00000339497 PAX4O43316 350 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 TSPAN13O95857 204 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 AZU1P20160 251 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 CRPP02741 224 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 LENEPQ9Y5L5 61 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 CKS1BP61024 79 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
CCNY-202ENST00000339497 MRPL53Q96EL3 112 aaKnown RBP12.42□□□□□ -0.42
CCNY-202ENST00000339497 DSCAML1Q8TD84 2053 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 LGALS1P09382 135 aaKnown RBP12.41□□□□□ -0.42
CCNY-202ENST00000339497 SLURP1P55000 103 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 TMEM86BQ8N661 226 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 LINC01548A6NM66 108 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 NPSP0C0P6 89 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 LMO4P61968 165 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
CCNY-202ENST00000339497 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 C16orf54Q6UWD8 224 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 TMEM141Q96I45 108 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 LRRK2Q5S007 2527 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 RNASE13Q5GAN3 156 aaKnown RBP12.4□□□□□ -0.42
CCNY-202ENST00000339497 Q6ZVH6 145 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 C20orf78Q9BR46 151 aa12.4□□□□□ -0.42
CCNY-202ENST00000339497 HLA-DRB4P13762 266 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 DLX4Q92988 240 aaPredicted RBP12.39□□□□□ -0.43
CCNY-202ENST00000339497 HLA-DRB4X5D2U9 266 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 RPL39LQ96EH5 51 aaKnown RBP12.39□□□□□ -0.43
CCNY-202ENST00000339497 KIR2DL5BA0A0G2JN68 375 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 KIR2DL5BA0A0G2JPC4 375 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 UNQ9165/PRO28630Q6UXU0 137 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 FOXI2Q6ZQN5 318 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 KIR2DL5AQ8N109 375 aa12.39□□□□□ -0.43
CCNY-202ENST00000339497 TRBV12-3P01733 135 aa12.38□□□□□ -0.43
CCNY-202ENST00000339497 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
CCNY-202ENST00000339497 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
CCNY-202ENST00000339497 BVES-AS1Q5T3Y7 98 aa12.38□□□□□ -0.43
CCNY-202ENST00000339497 LINC00322Q6ZN03 302 aaPredicted RBP12.38□□□□□ -0.43
CCNY-202ENST00000339497 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
CCNY-202ENST00000339497 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
CCNY-202ENST00000339497 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
CCNY-202ENST00000339497 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
CCNY-202ENST00000339497 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
CCNY-202ENST00000339497 IGHG2P01859 326 aa12.36□□□□□ -0.43
CCNY-202ENST00000339497 ZNF493Q6ZR52 646 aa12.36□□□□□ -0.43
CCNY-202ENST00000339497 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
CCNY-202ENST00000339497 FN1P02751 2386 aaKnown RBP12.35□□□□□ -0.43
CCNY-202ENST00000339497 CCL24O00175 119 aa12.35□□□□□ -0.43
CCNY-202ENST00000339497 ATXN8Q156A1 80 aa12.35□□□□□ -0.43
CCNY-202ENST00000339497 A0A1B0GV72 72 aa12.35□□□□□ -0.43
CCNY-202ENST00000339497 ODF3BA8MYP8 253 aa12.35□□□□□ -0.43
CCNY-202ENST00000339497 DEFB121Q5J5C9 76 aa12.35□□□□□ -0.43
CCNY-202ENST00000339497 C19orf71A6NCJ1 209 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 S100A7L2Q5SY68 101 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 C3orf56Q8N813 242 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 SIGMAR1Q99720 223 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 A0A087WW49 117 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 K7ERJ3 54 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 PRRC2AP48634 2157 aaKnown RBP12.34□□□□□ -0.43
CCNY-202ENST00000339497 F5H768 121 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 GAGE6Q13070 117 aa12.34□□□□□ -0.43
CCNY-202ENST00000339497 TRBV25-1A0A075B6N4 114 aa12.33□□□□□ -0.44
CCNY-202ENST00000339497 C9orf118A6NHY6 69 aa12.33□□□□□ -0.44
CCNY-202ENST00000339497 JPT2Q9H910 190 aa12.33□□□□□ -0.44
CCNY-202ENST00000339497 U3KQE9 123 aa12.33□□□□□ -0.44
CCNY-202ENST00000339497 C9JAW5 83 aa12.33□□□□□ -0.44
CCNY-202ENST00000339497 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
CCNY-202ENST00000339497 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
CCNY-202ENST00000339497 CCDC140Q96MF4 163 aa12.32□□□□□ -0.44
CCNY-202ENST00000339497 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
CCNY-202ENST00000339497 J3QQQ9 107 aa12.32□□□□□ -0.44
CCNY-202ENST00000339497 SLC25A20O43772 301 aa12.32□□□□□ -0.44
CCNY-202ENST00000339497 TMEM243Q9BU79 118 aa12.32□□□□□ -0.44
CCNY-202ENST00000339497 A0A096LPF7 62 aa12.31□□□□□ -0.44
CCNY-202ENST00000339497 SS18Q15532 418 aa12.31□□□□□ -0.44
CCNY-202ENST00000339497 NOP10Q9NPE3 64 aaKnown RBP12.31□□□□□ -0.44
CCNY-202ENST00000339497 ZNF80P51504 273 aaPredicted RBP12.31□□□□□ -0.44
CCNY-202ENST00000339497 DAD1P61803 113 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms