RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 PTPN13Q12923 2485 aa9.62□□□□□ -0.87
RIOK3-201ENST00000339486 J3QQQ9 107 aa9.62□□□□□ -0.87
RIOK3-201ENST00000339486 PLEKHB2Q96CS7 222 aa9.62□□□□□ -0.87
RIOK3-201ENST00000339486 TCF15Q12870 199 aa9.62□□□□□ -0.87
RIOK3-201ENST00000339486 ATXN8Q156A1 80 aa9.62□□□□□ -0.87
RIOK3-201ENST00000339486 M0R2P5 195 aa9.61□□□□□ -0.87
RIOK3-201ENST00000339486 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
RIOK3-201ENST00000339486 TMEM95Q3KNT9 176 aa9.61□□□□□ -0.87
RIOK3-201ENST00000339486 C10orf126Q8N4M7 172 aa9.61□□□□□ -0.87
RIOK3-201ENST00000339486 PIP4P1Q86T03 277 aa9.6□□□□□ -0.87
RIOK3-201ENST00000339486 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
RIOK3-201ENST00000339486 UBE2E1P51965 193 aa9.6□□□□□ -0.87
RIOK3-201ENST00000339486 BPESC1Q9GZL8 116 aa9.6□□□□□ -0.87
RIOK3-201ENST00000339486 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 TEN1Q86WV5 123 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 TNRC6BQ9UPQ9 1833 aaKnown RBP9.59□□□□□ -0.87
RIOK3-201ENST00000339486 TMEM141Q96I45 108 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 DYNLRB2Q8TF09 96 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 CELSR3Q9NYQ7 3312 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 H3BUX3 64 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 Q8N9W7 124 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 DUX5Q96PT3 197 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 TIMM21Q9BVV7 248 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 HHLA3Q9XRX5 114 aa9.59□□□□□ -0.87
RIOK3-201ENST00000339486 ADAMTS20P59510 1910 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 INSL3P51460 131 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 RPL39P62891 51 aaKnown RBP9.58□□□□□ -0.88
RIOK3-201ENST00000339486 ZFP2Q6ZN57 461 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 CUL9Q8IWT3 2517 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 C11orf86A6NJI1 115 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 B5MCH6 92 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 ATP5J2P56134 94 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 TRAV8-3A0A0A6YYJ7 113 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 CRYBA4P53673 196 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 C19orf54Q5BKX5 351 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
RIOK3-201ENST00000339486 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 KLRB1Q12918 225 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 A4D1N5 150 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 PIMREGQ9BSJ6 248 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 NBEAQ8NFP9 2946 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 CFC1BP0CG36 223 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 CFC1P0CG37 223 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 MRPL53Q96EL3 112 aaKnown RBP9.57□□□□□ -0.88
RIOK3-201ENST00000339486 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
RIOK3-201ENST00000339486 KLK9Q9UKQ9 250 aa9.57□□□□□ -0.88
RIOK3-201ENST00000339486 GATD1Q8NB37 220 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 ZNF48Q96MX3 618 aaPredicted RBP9.56□□□□□ -0.88
RIOK3-201ENST00000339486 SS18L2Q9UHA2 77 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 PTPRBP23467 1997 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 LENEPQ9Y5L5 61 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 MT-ATP8P03928 68 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
RIOK3-201ENST00000339486 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
RIOK3-201ENST00000339486 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
RIOK3-201ENST00000339486 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 ANKRD29Q8N6D5 301 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 H3BMM0 161 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 USMG5Q96IX5 58 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 C11orf21Q9P2W6 132 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 DNAL4O96015 105 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 IGF1P05019 195 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 ZNF625Q96I27 306 aaPredicted RBP9.55□□□□□ -0.88
RIOK3-201ENST00000339486 YAE1D1Q9NRH1 226 aa9.55□□□□□ -0.88
RIOK3-201ENST00000339486 C16orf54Q6UWD8 224 aa9.54□□□□□ -0.88
RIOK3-201ENST00000339486 TRPT1Q86TN4 253 aaKnown RBP9.54□□□□□ -0.88
RIOK3-201ENST00000339486 LY6G5BQ8NDX9 201 aa9.54□□□□□ -0.88
RIOK3-201ENST00000339486 NDUFA4O00483 81 aa9.54□□□□□ -0.88
RIOK3-201ENST00000339486 MRPS12O15235 138 aaKnown RBP9.54□□□□□ -0.88
RIOK3-201ENST00000339486 RNASE13Q5GAN3 156 aaKnown RBP9.54□□□□□ -0.88
RIOK3-201ENST00000339486 LINC01587Q99440 93 aa9.54□□□□□ -0.88
RIOK3-201ENST00000339486 TOMM7Q9P0U1 55 aa9.54□□□□□ -0.88
RIOK3-201ENST00000339486 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 IGHV1-69DA0A0B4J2H0 117 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 UCNP55089 124 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 RASL10AQ92737 203 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 JPT2Q9H910 190 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 TCL1BO95988 128 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 SUMO4Q6EEV6 95 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 LY6LH3BQJ8 138 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 GAGE5Q13069 117 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 GAGE6Q13070 117 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 Q6ZUT4 128 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 NDUFA11Q86Y39 141 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
RIOK3-201ENST00000339486 COPS9Q8WXC6 57 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 LINC01548A6NM66 108 aa9.53□□□□□ -0.88
RIOK3-201ENST00000339486 MRGPRG-AS1Q2M3A8 158 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms