RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 SMR3AQ99954 134 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 PMCHL2Q9BQD1 86 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 SCRT2Q9NQ03 307 aa12.1□□□□□ -0.47
SCNN1A-202ENST00000338748 SETXQ7Z333 2677 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-202ENST00000338748 PPBPP02775 128 aa12.09□□□□□ -0.47
SCNN1A-202ENST00000338748 CACNG7P62955 275 aa12.09□□□□□ -0.47
SCNN1A-202ENST00000338748 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
SCNN1A-202ENST00000338748 NRACQ8N912 160 aa12.09□□□□□ -0.47
SCNN1A-202ENST00000338748 HSPB8Q9UJY1 196 aa12.09□□□□□ -0.47
SCNN1A-202ENST00000338748 SPINK13Q1W4C9 94 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 TMEM61Q8N0U2 210 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 DPF1Q92782 380 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 PHLDA3Q9Y5J5 127 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
SCNN1A-202ENST00000338748 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
SCNN1A-202ENST00000338748 IGLL1P15814 213 aa12.07□□□□□ -0.48
SCNN1A-202ENST00000338748 ZNF124Q15973 351 aa12.07□□□□□ -0.48
SCNN1A-202ENST00000338748 C7orf71A4D174 169 aa12.07□□□□□ -0.48
SCNN1A-202ENST00000338748 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
SCNN1A-202ENST00000338748 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
SCNN1A-202ENST00000338748 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 IGLC3P0DOY3 106 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 CD28P10747 220 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 C14orf178Q8N769 122 aaPredicted RBP12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 TP73-AS1Q9UF72 201 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 IGLV2-18A0A075B6J9 118 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 hDV102S1A0JD36 115 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 AMTNQ6UX39 209 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
SCNN1A-202ENST00000338748 HBDP02042 147 aa12.05□□□□□ -0.48
SCNN1A-202ENST00000338748 NUTF2P61970 127 aaKnown RBP12.05□□□□□ -0.48
SCNN1A-202ENST00000338748 CD7P09564 240 aa12.05□□□□□ -0.48
SCNN1A-202ENST00000338748 MED14OSP0DP75 135 aa12.05□□□□□ -0.48
SCNN1A-202ENST00000338748 LINC01545Q5VT33 79 aa12.05□□□□□ -0.48
SCNN1A-202ENST00000338748 PET117Q6UWS5 81 aa12.05□□□□□ -0.48
SCNN1A-202ENST00000338748 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 LEPP41159 167 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 CDKN1BP46527 198 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 DEFB131AP59861 70 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 FOXI2Q6ZQN5 318 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 JPT2Q9H910 190 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 PEMTQ9UBM1 199 aa12.04□□□□□ -0.48
SCNN1A-202ENST00000338748 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 NXPH4O95158 308 aa12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 RNASE1P07998 156 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 RBMY1A1P0DJD3 496 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 RBMY1CP0DJD4 496 aa12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 RBMY1FQ15415 496 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 MRPL52Q86TS9 123 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 NXT2Q9NPJ8 142 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
SCNN1A-202ENST00000338748 C20orf202A1L168 122 aa12.02□□□□□ -0.48
SCNN1A-202ENST00000338748 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.48
SCNN1A-202ENST00000338748 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 FHL3Q13643 280 aa12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 Q8N1Y9 231 aa12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 RASL10AQ92737 203 aa12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 DPH3P1Q9H4G8 78 aa12.02□□□□□ -0.49
SCNN1A-202ENST00000338748 MGPP08493 103 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 BATFQ16520 125 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 DEFB114Q30KQ6 69 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 Q8N8P6 123 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 IGHV3-16A0A0C4DH30 117 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 TCAPO15273 167 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 AP1S3Q96PC3 154 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 UQCR10Q9UDW1 63 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
SCNN1A-202ENST00000338748 DUSP14O95147 198 aaKnown RBP12□□□□□ -0.49
SCNN1A-202ENST00000338748 LINC00315P59091 139 aa12□□□□□ -0.49
SCNN1A-202ENST00000338748 TMEM158Q8WZ71 300 aa12□□□□□ -0.49
SCNN1A-202ENST00000338748 NSD1Q96L73 2696 aaPredicted RBP12□□□□□ -0.49
SCNN1A-202ENST00000338748 Q6ZN92 141 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 IFI27L1Q96BM0 104 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 PRSS47A8MTI9 375 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 H3BMM0 161 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 CCL24O00175 119 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 HLA-DRB4P13762 266 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 FCER1GP30273 86 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 C9orf85Q96MD7 179 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 MAP6D1Q9H9H5 199 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 HLA-DRB4X5D2U9 266 aa11.99□□□□□ -0.49
SCNN1A-202ENST00000338748 IGHV1OR15-1A0A075B7D0 117 aa11.98□□□□□ -0.49
SCNN1A-202ENST00000338748 A0A087WWL8 130 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms