RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ELANEP08246 267 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 RNASE13Q5GAN3 156 aaKnown RBP10.73□□□□□ -0.69
RTN4-202ENST00000337526 SPRY4Q9C004 299 aa10.73□□□□□ -0.69
RTN4-202ENST00000337526 NPBQ8NG41 125 aa10.73□□□□□ -0.69
RTN4-202ENST00000337526 RNF114Q9Y508 228 aa10.73□□□□□ -0.69
RTN4-202ENST00000337526 KIF26AQ9ULI4 1882 aaPredicted RBP10.73□□□□□ -0.69
RTN4-202ENST00000337526 H3BUA1 57 aa10.73□□□□□ -0.69
RTN4-202ENST00000337526 BUB3O43684 328 aa10.73□□□□□ -0.69
RTN4-202ENST00000337526 ODF3L1Q8IXM7 274 aa10.73□□□□□ -0.69
RTN4-202ENST00000337526 Q6ZPA2 131 aa10.72□□□□□ -0.69
RTN4-202ENST00000337526 PROP1O75360 226 aa10.72□□□□□ -0.69
RTN4-202ENST00000337526 IGLV1-47P01700 117 aa10.72□□□□□ -0.69
RTN4-202ENST00000337526 MSMPQ1L6U9 139 aa10.72□□□□□ -0.69
RTN4-202ENST00000337526 SEM1Q6ZVN7 128 aa10.72□□□□□ -0.69
RTN4-202ENST00000337526 GAGE6Q13070 117 aa10.72□□□□□ -0.69
RTN4-202ENST00000337526 A0A1W2PNU3 283 aaPredicted RBP10.71□□□□□ -0.69
RTN4-202ENST00000337526 SOCS3O14543 225 aa10.71□□□□□ -0.69
RTN4-202ENST00000337526 WISP2O76076 250 aa10.71□□□□□ -0.69
RTN4-202ENST00000337526 P0C879 139 aa10.71□□□□□ -0.7
RTN4-202ENST00000337526 NXPH4O95158 308 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
RTN4-202ENST00000337526 J3QLI3 93 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 IGLV2-23P01705 113 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 CFC1BP0CG36 223 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 CFC1P0CG37 223 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 RHOHQ15669 191 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 HERVK_113P63121 156 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 FOXI2Q6ZQN5 318 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 DSCAML1Q8TD84 2053 aa10.7□□□□□ -0.7
RTN4-202ENST00000337526 HIVEP2P31629 2446 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 SCRT2Q9NQ03 307 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 PLA2G5P39877 138 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 NTN5Q8WTR8 489 aaPredicted RBP10.69□□□□□ -0.7
RTN4-202ENST00000337526 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 Q96MF0 132 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 F5H768 121 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 BLCAPP62952 87 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 TTTY13Q9BZ97 58 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 Q8N9W7 124 aa10.69□□□□□ -0.7
RTN4-202ENST00000337526 ABCA2Q9BZC7 2435 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 NCKAP5O14513 1909 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 HOXD3P31249 432 aaPredicted RBP10.68□□□□□ -0.7
RTN4-202ENST00000337526 SPANXA1Q9NS26 97 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 NAV2Q8IVL1 2488 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 NCOR2Q9Y618 2525 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 DAD1P61803 113 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 C9orf153Q5TBE3 101 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 SH2D6Q7Z4S9 175 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
RTN4-202ENST00000337526 IGLL5B9A064 214 aa10.67□□□□□ -0.7
RTN4-202ENST00000337526 ZNF503Q96F45 646 aa10.67□□□□□ -0.7
RTN4-202ENST00000337526 CRYGCP07315 174 aa10.67□□□□□ -0.7
RTN4-202ENST00000337526 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
RTN4-202ENST00000337526 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
RTN4-202ENST00000337526 WI2-2373I1.2A0A1W2PRP0 233 aa10.67□□□□□ -0.7
RTN4-202ENST00000337526 NAV3Q8IVL0 2385 aa10.66□□□□□ -0.7
RTN4-202ENST00000337526 TLN1Q9Y490 2541 aaKnown RBP10.66□□□□□ -0.7
RTN4-202ENST00000337526 BOD1L2Q8IYS8 172 aa10.66□□□□□ -0.7
RTN4-202ENST00000337526 U3KQE9 123 aa10.66□□□□□ -0.7
RTN4-202ENST00000337526 ZNF561-AS1K7EIQ3 104 aa10.66□□□□□ -0.7
RTN4-202ENST00000337526 IGF2-ASQ6U949 168 aa10.66□□□□□ -0.7
RTN4-202ENST00000337526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.7
RTN4-202ENST00000337526 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.7
RTN4-202ENST00000337526 CGB3P0DN86 165 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 CGB7P0DN87 165 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 FXYD2P54710 66 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 OBSL1O75147 1896 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 C16orf54Q6UWD8 224 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 TRAV13-2A0A0B4J235 113 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 A0A0J9YXV3 536 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 C19orf71A6NCJ1 209 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 UTF1Q5T230 341 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
RTN4-202ENST00000337526 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
RTN4-202ENST00000337526 ZFP2Q6ZN57 461 aa10.65□□□□□ -0.71
RTN4-202ENST00000337526 HIVEP3Q5T1R4 2406 aa10.65□□□□□ -0.71
RTN4-202ENST00000337526 Q9H8V8 135 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 C2orf16Q68DN1 1984 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 IGHV4-38-2P0DP08 117 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 IGKV1D-37A0A075B6S9 117 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 TAX1BP3O14907 124 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 IFITM1P13164 125 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 Q8N7P7 452 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 UBL5Q9BZL1 73 aa10.64□□□□□ -0.71
RTN4-202ENST00000337526 CTRLP40313 264 aa10.63□□□□□ -0.71
RTN4-202ENST00000337526 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
RTN4-202ENST00000337526 IGF2RP11717 2491 aa10.63□□□□□ -0.71
RTN4-202ENST00000337526 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
RTN4-202ENST00000337526 F8WEM9 126 aa10.62□□□□□ -0.71
RTN4-202ENST00000337526 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms