RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
HDAC5-202ENST00000336057 TSSC4Q9Y5U2 329 aaPredicted RBP12.23□□□□□ -0.45
HDAC5-202ENST00000336057 AZU1P20160 251 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 JPT2Q9H910 190 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 PRAC2D3DTV9 90 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 PPDPFLQ8WWR9 84 aa12.22□□□□□ -0.45
HDAC5-202ENST00000336057 IGHV4-61A0A0C4DH41 118 aa12.21□□□□□ -0.45
HDAC5-202ENST00000336057 C16orf54Q6UWD8 224 aa12.21□□□□□ -0.45
HDAC5-202ENST00000336057 AMTNQ6UX39 209 aa12.21□□□□□ -0.45
HDAC5-202ENST00000336057 FOXI2Q6ZQN5 318 aa12.21□□□□□ -0.45
HDAC5-202ENST00000336057 OVOL2Q9BRP0 275 aa12.21□□□□□ -0.45
HDAC5-202ENST00000336057 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.46
HDAC5-202ENST00000336057 ADORA2A-AS1P86434 159 aa12.21□□□□□ -0.46
HDAC5-202ENST00000336057 WDR87Q6ZQQ6 2873 aa12.21□□□□□ -0.46
HDAC5-202ENST00000336057 IGHV4-59P01825 116 aa12.2□□□□□ -0.46
HDAC5-202ENST00000336057 LGALS1P09382 135 aaKnown RBP12.2□□□□□ -0.46
HDAC5-202ENST00000336057 FGF6P10767 208 aa12.2□□□□□ -0.46
HDAC5-202ENST00000336057 DEFB112Q30KQ8 113 aa12.2□□□□□ -0.46
HDAC5-202ENST00000336057 CTRLP40313 264 aa12.2□□□□□ -0.46
HDAC5-202ENST00000336057 RHOHQ15669 191 aa12.2□□□□□ -0.46
HDAC5-202ENST00000336057 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
HDAC5-202ENST00000336057 OTOGLQ3ZCN5 2332 aa12.2□□□□□ -0.46
HDAC5-202ENST00000336057 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 SS18Q15532 418 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 Q96MF0 132 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 FANCD2OSQ96PS1 177 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 C5orf56Q8N8D9 126 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 ZNF48Q96MX3 618 aaPredicted RBP12.19□□□□□ -0.46
HDAC5-202ENST00000336057 ZFP36P26651 326 aaKnown RBP12.19□□□□□ -0.46
HDAC5-202ENST00000336057 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 IGHV4-38-2P0DP08 117 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 BLCAPP62952 87 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 AJUBAQ96IF1 538 aa12.19□□□□□ -0.46
HDAC5-202ENST00000336057 GOLGB1Q14789 3259 aaKnown RBP12.19□□□□□ -0.46
HDAC5-202ENST00000336057 CFHR3Q02985 330 aa12.18□□□□□ -0.46
HDAC5-202ENST00000336057 Q8NA96 180 aa12.18□□□□□ -0.46
HDAC5-202ENST00000336057 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
HDAC5-202ENST00000336057 BOD1L2Q8IYS8 172 aa12.18□□□□□ -0.46
HDAC5-202ENST00000336057 H3BMM0 161 aa12.18□□□□□ -0.46
HDAC5-202ENST00000336057 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
HDAC5-202ENST00000336057 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 VWC2LB2RUY7 222 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 FBXL19-AS1Q494R0 122 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 VPREB3Q9UKI3 123 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
HDAC5-202ENST00000336057 C22orf34Q6ZV56 151 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 RNF114Q9Y508 228 aa12.17□□□□□ -0.46
HDAC5-202ENST00000336057 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
HDAC5-202ENST00000336057 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
HDAC5-202ENST00000336057 GAGE7O76087 117 aa12.16□□□□□ -0.46
HDAC5-202ENST00000336057 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
HDAC5-202ENST00000336057 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
HDAC5-202ENST00000336057 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
HDAC5-202ENST00000336057 CEP192Q8TEP8 1941 aa12.15□□□□□ -0.46
HDAC5-202ENST00000336057 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
HDAC5-202ENST00000336057 MLST8Q9BVC4 326 aa12.15□□□□□ -0.46
HDAC5-202ENST00000336057 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
HDAC5-202ENST00000336057 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
HDAC5-202ENST00000336057 GDF5OSQ5U4N7 250 aa12.15□□□□□ -0.46
HDAC5-202ENST00000336057 IGHV4-30-2A0A087WSY4 118 aa12.14□□□□□ -0.47
HDAC5-202ENST00000336057 SIRPDQ9H106 197 aa12.14□□□□□ -0.47
HDAC5-202ENST00000336057 DAZAP2Q15038 168 aaPredicted RBP12.14□□□□□ -0.47
HDAC5-202ENST00000336057 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
HDAC5-202ENST00000336057 PRO3102Q9H379 93 aa12.14□□□□□ -0.47
HDAC5-202ENST00000336057 CACNA1AO00555 2505 aa12.14□□□□□ -0.47
HDAC5-202ENST00000336057 HERVK_113P63121 156 aa12.14□□□□□ -0.47
HDAC5-202ENST00000336057 TAX1BP3O14907 124 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 ZFP2Q6ZN57 461 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 IGLL5B9A064 214 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 TTTY13Q9BZ97 58 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
HDAC5-202ENST00000336057 PTPRSQ13332 1948 aa12.12□□□□□ -0.47
HDAC5-202ENST00000336057 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
HDAC5-202ENST00000336057 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
HDAC5-202ENST00000336057 PFN2P35080 140 aa12.12□□□□□ -0.47
HDAC5-202ENST00000336057 GAGE6Q13070 117 aa12.12□□□□□ -0.47
HDAC5-202ENST00000336057 DNAJC30Q96LL9 226 aa12.12□□□□□ -0.47
HDAC5-202ENST00000336057 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 CFC1P0CG37 223 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 FXYD2P54710 66 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 SPATA12Q7Z6I5 190 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 HIST1H4AP62805 103 aaKnown RBP12.11□□□□□ -0.47
HDAC5-202ENST00000336057 INAFM2P0DMQ5 153 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 DEFB136Q30KP8 78 aa12.11□□□□□ -0.47
HDAC5-202ENST00000336057 CSPG4Q6UVK1 2322 aa12.1□□□□□ -0.47
HDAC5-202ENST00000336057 U3KQE9 123 aa12.1□□□□□ -0.47
HDAC5-202ENST00000336057 LRP4O75096 1905 aa12.1□□□□□ -0.47
HDAC5-202ENST00000336057 ODF1Q14990 250 aa12.1□□□□□ -0.47
HDAC5-202ENST00000336057 ODF3BA8MYP8 253 aa12.1□□□□□ -0.47
HDAC5-202ENST00000336057 KIAA1549Q9HCM3 1950 aa12.1□□□□□ -0.47
HDAC5-202ENST00000336057 K7EMT4 169 aa12.09□□□□□ -0.47
HDAC5-202ENST00000336057 ZNF80P51504 273 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-202ENST00000336057 TP53TG3Q9ULZ0 132 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms