RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 C9orf139Q6ZV77 190 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
VPS33B-201ENST00000333371 SUMO2P61956 95 aaKnown RBP9.3□□□□□ -0.92
VPS33B-201ENST00000333371 RPL24P83731 157 aaKnown RBP9.3□□□□□ -0.92
VPS33B-201ENST00000333371 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 CREBBPQ92793 2442 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 IGHV4-30-2A0A087WSY4 118 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 CIDEAO60543 219 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 PRB1P04280 392 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 BLCAPP62952 87 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 OR10J6PQ8NGY7 276 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 JPT2Q9H910 190 aa9.3□□□□□ -0.92
VPS33B-201ENST00000333371 USP9YO00507 2555 aaPredicted RBP9.3□□□□□ -0.92
VPS33B-201ENST00000333371 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 SOCS3O14543 225 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 HIST1H4GQ99525 98 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 PF4V1P10720 104 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 EMP1P54849 157 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 ZFYVE26Q68DK2 2539 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 F8VRH5 84 aa9.29□□□□□ -0.92
VPS33B-201ENST00000333371 POLQO75417 2590 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 TRAV21A0A0B4J279 112 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 IGLL5B9A064 214 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 H7C1H1 209 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
VPS33B-201ENST00000333371 ASIPP42127 132 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 CYSLTR1Q9Y271 337 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 USP24Q9UPU5 2620 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 H3BUX3 64 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 C2orf66Q6UXQ4 117 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 DPH3P1Q9H4G8 78 aa9.28□□□□□ -0.92
VPS33B-201ENST00000333371 H3BMG7 143 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 PLNP26678 52 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 WFDC2Q14508 124 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 TMEM95Q3KNT9 176 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 NEXN-AS1Q8NBZ9 246 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 BAALCQ8WXS3 180 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 TOMM6Q96B49 74 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 FAM208BQ5VWN6 2430 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 MSMBP08118 114 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 NRGNQ92686 78 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 ZNF479Q96JC4 524 aa9.27□□□□□ -0.93
VPS33B-201ENST00000333371 NDUFA4O00483 81 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 DUSP14O95147 198 aaKnown RBP9.26□□□□□ -0.93
VPS33B-201ENST00000333371 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 TRBV7-3A0A075B6L6 115 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 OR11H12B2RN74 326 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 E9PLD3 99 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 HLA-DRB4P13762 266 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 ORMDL2Q53FV1 153 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 OR11H1Q8NG94 326 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 HLA-DRB4X5D2U9 266 aa9.26□□□□□ -0.93
VPS33B-201ENST00000333371 A0A087WWL8 130 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 OVOL1O14753 267 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 KLHL30-AS1Q8NEE0 82 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 PLEKHB2Q96CS7 222 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 MYMXA0A1B0GTQ4 84 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 PSMG4Q5JS54 123 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 PRADC1Q9BSG0 188 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 ZNF462Q96JM2 2506 aa9.25□□□□□ -0.93
VPS33B-201ENST00000333371 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
VPS33B-201ENST00000333371 COX6B1P14854 86 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 RPL39P62891 51 aaKnown RBP9.24□□□□□ -0.93
VPS33B-201ENST00000333371 FAM19A4Q96LR4 140 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 IGKV3-20P01619 116 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 CD300EQ496F6 205 aaPredicted RBP9.24□□□□□ -0.93
VPS33B-201ENST00000333371 FOXI2Q6ZQN5 318 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 MXRA5Q9NR99 2828 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 B4DSR2 109 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 DSCR9P59020 149 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 C10orf99Q6UWK7 81 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
VPS33B-201ENST00000333371 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 TSHBP01222 138 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 CRYGDP07320 174 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 SLC25A16P16260 332 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 LINC00315P59091 139 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 BBC3Q96PG8 261 aaPredicted RBP9.23□□□□□ -0.93
VPS33B-201ENST00000333371 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 IGHG2P01859 326 aa9.23□□□□□ -0.93
VPS33B-201ENST00000333371 CRIP2P52943 208 aaPredicted RBP9.23□□□□□ -0.93
VPS33B-201ENST00000333371 ANKRD17O75179 2603 aaKnown RBP9.23□□□□□ -0.93
VPS33B-201ENST00000333371 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
VPS33B-201ENST00000333371 ETDBQ3ZM63 59 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms