RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TRAV8-2A0A0B4J237 113 aa14□□□□□ -0.17
PKP3-201ENST00000331563 ERCC8Q13216 396 aa14□□□□□ -0.17
PKP3-201ENST00000331563 CTSZQ9UBR2 303 aa14□□□□□ -0.17
PKP3-201ENST00000331563 SCGB3A1Q96QR1 104 aa14□□□□□ -0.17
PKP3-201ENST00000331563 CSDC2Q9Y534 153 aaKnown RBP14□□□□□ -0.17
PKP3-201ENST00000331563 IGHV1-3A0A0C4DH29 117 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 C8orf31Q8N9H6 132 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 NRGNQ92686 78 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 PRADC1Q9BSG0 188 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 CSMD2Q7Z408 3487 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 TCL1BO95988 128 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 RPL7P18124 248 aaKnown RBP13.99□□□□□ -0.17
PKP3-201ENST00000331563 UCNP55089 124 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 ADORA2A-AS1P86434 159 aa13.99□□□□□ -0.17
PKP3-201ENST00000331563 MYO18BQ8IUG5 2567 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 IGHV3OR16-8A0A075B7F1 116 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 ZNF575Q86XF7 245 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 RASL10AQ92737 203 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 CNFNQ9BYD5 112 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 CENPEQ02224 2701 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 TMEM178BH3BS89 294 aa13.98□□□□□ -0.17
PKP3-201ENST00000331563 IGHV3-23P01764 117 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 PF4V1P10720 104 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 COX7A1P24310 79 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
PKP3-201ENST00000331563 Q6ZQT7 251 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 CD3EP07766 207 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 COX8CQ7Z4L0 72 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 OR10J6PQ8NGY7 276 aa13.97□□□□□ -0.17
PKP3-201ENST00000331563 PLEKHB2Q96CS7 222 aa13.96□□□□□ -0.17
PKP3-201ENST00000331563 MDFICQ9P1T7 246 aa13.96□□□□□ -0.17
PKP3-201ENST00000331563 SLC25A16P16260 332 aa13.96□□□□□ -0.17
PKP3-201ENST00000331563 UBE2D1P51668 147 aa13.96□□□□□ -0.17
PKP3-201ENST00000331563 SPANXN1Q5VSR9 72 aa13.96□□□□□ -0.17
PKP3-201ENST00000331563 CFHR4Q92496 578 aa13.96□□□□□ -0.17
PKP3-201ENST00000331563 CELSR2Q9HCU4 2923 aa13.96□□□□□ -0.18
PKP3-201ENST00000331563 TMEM155Q4W5P6 130 aa13.96□□□□□ -0.18
PKP3-201ENST00000331563 IGHV3-35A0A0C4DH35 117 aa13.95□□□□□ -0.18
PKP3-201ENST00000331563 NRACQ8N912 160 aa13.95□□□□□ -0.18
PKP3-201ENST00000331563 IL17RELQ6ZVW7 336 aa13.95□□□□□ -0.18
PKP3-201ENST00000331563 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
PKP3-201ENST00000331563 KLHL30-AS1Q8NEE0 82 aa13.95□□□□□ -0.18
PKP3-201ENST00000331563 MFAP4P55083 255 aa13.94□□□□□ -0.18
PKP3-201ENST00000331563 EPG5Q9HCE0 2579 aa13.94□□□□□ -0.18
PKP3-201ENST00000331563 TRAV12-1A0A0B4J245 112 aa13.94□□□□□ -0.18
PKP3-201ENST00000331563 DLX6P56179 175 aa13.94□□□□□ -0.18
PKP3-201ENST00000331563 OR11H6Q8NGC7 330 aa13.93□□□□□ -0.18
PKP3-201ENST00000331563 ONECUT1Q9UBC0 465 aa13.93□□□□□ -0.18
PKP3-201ENST00000331563 USP24Q9UPU5 2620 aa13.93□□□□□ -0.18
PKP3-201ENST00000331563 PRAC2D3DTV9 90 aa13.92□□□□□ -0.18
PKP3-201ENST00000331563 BUB1B-PAK6H3BSN5 160 aa13.92□□□□□ -0.18
PKP3-201ENST00000331563 C3orf56Q8N813 242 aa13.92□□□□□ -0.18
PKP3-201ENST00000331563 SRSF2Q01130 221 aaKnown RBP13.92□□□□□ -0.18
PKP3-201ENST00000331563 NDUFA11Q86Y39 141 aa13.92□□□□□ -0.18
PKP3-201ENST00000331563 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
PKP3-201ENST00000331563 IGKV3D-20A0A0C4DH25 116 aa13.91□□□□□ -0.18
PKP3-201ENST00000331563 RNF182Q8N6D2 247 aa13.91□□□□□ -0.18
PKP3-201ENST00000331563 SLC25A20O43772 301 aa13.91□□□□□ -0.18
PKP3-201ENST00000331563 SMIM2Q9BVW6 85 aa13.91□□□□□ -0.18
PKP3-201ENST00000331563 DNAJC30Q96LL9 226 aa13.91□□□□□ -0.18
PKP3-201ENST00000331563 LINC01587Q99440 93 aa13.9□□□□□ -0.18
PKP3-201ENST00000331563 SMAD5-AS1Q9Y6J3 95 aa13.9□□□□□ -0.18
PKP3-201ENST00000331563 ORMDL2Q53FV1 153 aa13.9□□□□□ -0.18
PKP3-201ENST00000331563 C15orf53Q8NAA6 179 aa13.9□□□□□ -0.18
PKP3-201ENST00000331563 C9JAW5 83 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 CD7P09564 240 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 NEXN-AS1Q8NBZ9 246 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 ODF3Q96PU9 254 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 C21orf62Q9NYP8 219 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 EMP1P54849 157 aa13.89□□□□□ -0.19
PKP3-201ENST00000331563 IGFBPL1Q8WX77 278 aa13.88□□□□□ -0.19
PKP3-201ENST00000331563 B9A039 149 aa13.88□□□□□ -0.19
PKP3-201ENST00000331563 H7C2G1 150 aa13.88□□□□□ -0.19
PKP3-201ENST00000331563 TIMM23O14925 209 aa13.88□□□□□ -0.19
PKP3-201ENST00000331563 HES1Q14469 280 aa13.88□□□□□ -0.19
PKP3-201ENST00000331563 BAALCQ8WXS3 180 aa13.87□□□□□ -0.19
PKP3-201ENST00000331563 LINC00694P0DN24 101 aa13.87□□□□□ -0.19
PKP3-201ENST00000331563 C2orf66Q6UXQ4 117 aa13.87□□□□□ -0.19
PKP3-201ENST00000331563 TOMM6Q96B49 74 aa13.87□□□□□ -0.19
PKP3-201ENST00000331563 IGHV3-66A0A0C4DH42 116 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 SMIM9A6NGZ8 99 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 ZNF672Q499Z4 452 aaPredicted RBP13.86□□□□□ -0.19
PKP3-201ENST00000331563 Q8N1Y9 231 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 TRAV25A0A0B4J276 109 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 A0A1W2PPR1 153 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 CFC1BP0CG36 223 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 CFC1P0CG37 223 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 SUMO2P61956 95 aaKnown RBP13.86□□□□□ -0.19
PKP3-201ENST00000331563 CHCHD5Q9BSY4 110 aa13.86□□□□□ -0.19
PKP3-201ENST00000331563 C10orf126Q8N4M7 172 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 FAM208BQ5VWN6 2430 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 IGHV3OR16-13A0A075B7E8 117 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 IGHV3-74A0A0B4J1X5 117 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 TRAV8-4A0A0B4J246 113 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 M0R381 172 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 SPRY2O43597 315 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 HERVK_113P61574 105 aa13.85□□□□□ -0.19
PKP3-201ENST00000331563 TRPT1Q86TN4 253 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms