RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 HIST2H2BDQ6DRA6 164 aa10.4□□□□□ -0.75
TRAIP-201ENST00000331456 MRAP2Q96G30 205 aa10.4□□□□□ -0.75
TRAIP-201ENST00000331456 NXT2Q9NPJ8 142 aaKnown RBP10.4□□□□□ -0.75
TRAIP-201ENST00000331456 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
TRAIP-201ENST00000331456 CD7P09564 240 aa10.39□□□□□ -0.75
TRAIP-201ENST00000331456 SPINK13Q1W4C9 94 aa10.39□□□□□ -0.75
TRAIP-201ENST00000331456 OR2K2Q8NGT1 345 aa10.39□□□□□ -0.75
TRAIP-201ENST00000331456 SPAG8Q99932 426 aaPredicted RBP10.39□□□□□ -0.75
TRAIP-201ENST00000331456 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
TRAIP-201ENST00000331456 PAM16Q9Y3D7 125 aa10.39□□□□□ -0.75
TRAIP-201ENST00000331456 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
TRAIP-201ENST00000331456 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 SYS1-DBNDD2H3BUS1 97 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 C20orf144Q9BQM9 153 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 KNCNA6PVL3 124 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 CRXO43186 299 aaPredicted RBP10.38□□□□□ -0.75
TRAIP-201ENST00000331456 CD300EQ496F6 205 aaPredicted RBP10.38□□□□□ -0.75
TRAIP-201ENST00000331456 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
TRAIP-201ENST00000331456 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
TRAIP-201ENST00000331456 NXPH4O95158 308 aa10.37□□□□□ -0.75
TRAIP-201ENST00000331456 HBDP02042 147 aa10.37□□□□□ -0.75
TRAIP-201ENST00000331456 A8MTW9 85 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 H3BMM0 161 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 MAP6D1Q9H9H5 199 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 ITPR2Q14571 2701 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 LINC01546A6NGU7 62 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 SPRY2O43597 315 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 GAS8-AS1O95177 125 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
TRAIP-201ENST00000331456 SPATA45Q537H7 98 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
TRAIP-201ENST00000331456 Q8N8P6 123 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 NDUFAF3Q9BU61 184 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 ZNF747Q9BV97 191 aa10.36□□□□□ -0.75
TRAIP-201ENST00000331456 TRAV26-2A0A0B4J265 109 aa10.35□□□□□ -0.75
TRAIP-201ENST00000331456 IGHV3-16A0A0C4DH30 117 aa10.35□□□□□ -0.75
TRAIP-201ENST00000331456 PRSS47A8MTI9 375 aa10.35□□□□□ -0.75
TRAIP-201ENST00000331456 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
TRAIP-201ENST00000331456 NRACQ8N912 160 aa10.35□□□□□ -0.75
TRAIP-201ENST00000331456 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 MGPP08493 103 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 ZNF705AQ6ZN79 300 aaPredicted RBP10.34□□□□□ -0.75
TRAIP-201ENST00000331456 DEFB125Q8N687 156 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 AKAP9Q99996 3911 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 A0A096LNJ9 63 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 PPP1R17O96001 155 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 PROK1P58294 105 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 Q8N1Y9 231 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
TRAIP-201ENST00000331456 MYO9AB2RTY4 2548 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 FXYD7P58549 80 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 SPATA12Q7Z6I5 190 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
TRAIP-201ENST00000331456 H0Y8G0 127 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 FCER1GP30273 86 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 C14orf144Q96I85 54 aa10.33□□□□□ -0.76
TRAIP-201ENST00000331456 ACANP16112 2415 aa10.32□□□□□ -0.76
TRAIP-201ENST00000331456 ANK3Q12955 4377 aaKnown RBP10.32□□□□□ -0.76
TRAIP-201ENST00000331456 C20orf78Q9BR46 151 aa10.32□□□□□ -0.76
TRAIP-201ENST00000331456 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 CBY3A6NI87 242 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
TRAIP-201ENST00000331456 ZNF124Q15973 351 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 LINC01545Q5VT33 79 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 POM121L12Q8N7R1 296 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
TRAIP-201ENST00000331456 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
TRAIP-201ENST00000331456 INAFM1C9JVW0 142 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 SAP30O75446 220 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
TRAIP-201ENST00000331456 FOSL1P15407 271 aa10.31□□□□□ -0.76
TRAIP-201ENST00000331456 OR11H12B2RN74 326 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 HSBP1L1C9JCN9 74 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
TRAIP-201ENST00000331456 LAGE3Q14657 143 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 RASL10AQ92737 203 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
TRAIP-201ENST00000331456 ODF3L2Q3SX64 289 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 HIVEP2P31629 2446 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 ADARB2-AS1A8MUL3 147 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 CTAG1AP78358 180 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 STHQ8IWL8 128 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 TMEM158Q8WZ71 300 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 UQCR10Q9UDW1 63 aa10.29□□□□□ -0.76
TRAIP-201ENST00000331456 AGRNO00468 2067 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms