RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 LY6HO94772 140 aa13.8□□□□□ -0.2
CLSTN3-202ENST00000331148 TRBV20-1A0A075B6N2 111 aa13.8□□□□□ -0.2
CLSTN3-202ENST00000331148 C2orf66Q6UXQ4 117 aa13.8□□□□□ -0.2
CLSTN3-202ENST00000331148 ANKRD29Q8N6D5 301 aa13.8□□□□□ -0.2
CLSTN3-202ENST00000331148 KIR2DL4Q99706 377 aa13.8□□□□□ -0.2
CLSTN3-202ENST00000331148 UBTD1Q9HAC8 227 aa13.8□□□□□ -0.2
CLSTN3-202ENST00000331148 HRNRQ86YZ3 2850 aaPredicted RBP13.79□□□□□ -0.2
CLSTN3-202ENST00000331148 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
CLSTN3-202ENST00000331148 SS18L2Q9UHA2 77 aa13.79□□□□□ -0.2
CLSTN3-202ENST00000331148 BUB3O43684 328 aa13.79□□□□□ -0.2
CLSTN3-202ENST00000331148 TIMD4Q96H15 378 aa13.79□□□□□ -0.2
CLSTN3-202ENST00000331148 IGHV3-66A0A0C4DH42 116 aa13.78□□□□□ -0.2
CLSTN3-202ENST00000331148 ZFAND6Q6FIF0 208 aa13.78□□□□□ -0.2
CLSTN3-202ENST00000331148 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
CLSTN3-202ENST00000331148 ZFAND3Q9H8U3 227 aa13.78□□□□□ -0.2
CLSTN3-202ENST00000331148 TRAV8-2A0A0B4J237 113 aa13.77□□□□□ -0.21
CLSTN3-202ENST00000331148 A0A0J9YY99 117 aa13.77□□□□□ -0.21
CLSTN3-202ENST00000331148 TGFAP01135 160 aa13.77□□□□□ -0.21
CLSTN3-202ENST00000331148 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 ZNF843Q8N446 348 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 CITED1Q99966 193 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 TMEM262E9PQX1 116 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 GAGE5Q13069 117 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 GAGE6Q13070 117 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 TEX29Q8N6K0 151 aa13.76□□□□□ -0.21
CLSTN3-202ENST00000331148 CFC1BP0CG36 223 aa13.75□□□□□ -0.21
CLSTN3-202ENST00000331148 CFC1P0CG37 223 aa13.75□□□□□ -0.21
CLSTN3-202ENST00000331148 PRR9Q5T870 116 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 C9orf47Q6ZRZ4 202 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 C10orf126Q8N4M7 172 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 MRPL53Q96EL3 112 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 CLPSL1A2RUU4 121 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 C11orf86A6NJI1 115 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 M0R381 172 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 IGHV3-30P01768 117 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 IGHV3-30-5P0DP03 117 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 HIF1ANQ9NWT6 349 aa13.74□□□□□ -0.21
CLSTN3-202ENST00000331148 DCHS2Q6V1P9 2916 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 IGLV4-69A0A075B6H9 119 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 CRYGDP07320 174 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 HERVK_113P61574 105 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 Q6ZS46 218 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 DPH3P1Q9H4G8 78 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 SPRY2O43597 315 aa13.73□□□□□ -0.21
CLSTN3-202ENST00000331148 ODF3BA8MYP8 253 aa13.72□□□□□ -0.21
CLSTN3-202ENST00000331148 NHLRC4P0CG21 123 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-202ENST00000331148 SCGB1C2P0DMR2 95 aa13.72□□□□□ -0.21
CLSTN3-202ENST00000331148 SRD5A1P18405 259 aa13.72□□□□□ -0.21
CLSTN3-202ENST00000331148 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
CLSTN3-202ENST00000331148 DUSP14O95147 198 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 C14orf178Q8N769 122 aaPredicted RBP13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 MGPP08493 103 aa13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 EMP1P54849 157 aa13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 TSPEAR-AS2P59090 65 aa13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 Q8N6K4 173 aa13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 AJUBAQ96IF1 538 aa13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 PRO1854Q9UHT4 67 aa13.71□□□□□ -0.21
CLSTN3-202ENST00000331148 KMT2BQ9UMN6 2715 aaPredicted RBP13.71□□□□□ -0.22
CLSTN3-202ENST00000331148 IGHV3-49A0A0A0MS15 119 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 IGHV7-81A0A0B4J1V7 117 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 B5MCH6 92 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 SLC25A20O43772 301 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 CLEC3BP05452 202 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 TSHBP01222 138 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 PAPPA-AS1Q5QFB9 102 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 SLC25A29Q8N8R3 303 aa13.7□□□□□ -0.22
CLSTN3-202ENST00000331148 ZFYVE26Q68DK2 2539 aa13.69□□□□□ -0.22
CLSTN3-202ENST00000331148 M0QXV9 152 aa13.69□□□□□ -0.22
CLSTN3-202ENST00000331148 RHODO00212 210 aa13.69□□□□□ -0.22
CLSTN3-202ENST00000331148 IGF1P05019 195 aa13.69□□□□□ -0.22
CLSTN3-202ENST00000331148 C9JAW5 83 aa13.68□□□□□ -0.22
CLSTN3-202ENST00000331148 J3KRW8 73 aa13.68□□□□□ -0.22
CLSTN3-202ENST00000331148 PRTN3P24158 256 aa13.68□□□□□ -0.22
CLSTN3-202ENST00000331148 ASIPP42127 132 aa13.68□□□□□ -0.22
CLSTN3-202ENST00000331148 IGHV1-69DA0A0B4J2H0 117 aa13.67□□□□□ -0.22
CLSTN3-202ENST00000331148 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
CLSTN3-202ENST00000331148 CRIP2P52943 208 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-202ENST00000331148 FAM110DQ8TAY7 271 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-202ENST00000331148 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
CLSTN3-202ENST00000331148 DOPEY1Q5JWR5 2465 aa13.67□□□□□ -0.22
CLSTN3-202ENST00000331148 NDUFV3P56181 108 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 PMVKQ15126 192 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 GPHB5Q86YW7 130 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 PHLDA3Q9Y5J5 127 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 FLNCQ14315 2725 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 SNCGO76070 127 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 GAGE2BQ13066 116 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 ECSCRQ19T08 205 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 GAGE2EQ4V326 116 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 CLEC19AQ6UXS0 136 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 METTL26Q96S19 204 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 AMELXQ99217 191 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 GAGE2DQ9UEU5 116 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 LENEPQ9Y5L5 61 aa13.66□□□□□ -0.22
CLSTN3-202ENST00000331148 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms