RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ARHGAP32A7KAX9 2087 aa18.62■□□□□ 0.57
SOX1-201ENST00000330949 SLC25A29Q8N8R3 303 aa18.62■□□□□ 0.57
SOX1-201ENST00000330949 CACNA1BQ00975 2339 aa18.61■□□□□ 0.57
SOX1-201ENST00000330949 TIMD4Q96H15 378 aa18.61■□□□□ 0.57
SOX1-201ENST00000330949 NBR2O15453 112 aa18.6■□□□□ 0.57
SOX1-201ENST00000330949 FAM159AQ6UWV7 190 aa18.6■□□□□ 0.57
SOX1-201ENST00000330949 Q8N1Y9 231 aa18.6■□□□□ 0.57
SOX1-201ENST00000330949 PRR30Q53SZ7 412 aaPredicted RBP18.59■□□□□ 0.57
SOX1-201ENST00000330949 OR10J6PQ8NGY7 276 aa18.59■□□□□ 0.57
SOX1-201ENST00000330949 NTN5Q8WTR8 489 aaPredicted RBP18.59■□□□□ 0.57
SOX1-201ENST00000330949 COX7A1P24310 79 aa18.59■□□□□ 0.57
SOX1-201ENST00000330949 FAM57AQ8TBR7 257 aa18.59■□□□□ 0.57
SOX1-201ENST00000330949 AGPAT4-IT1Q9H0P7 198 aa18.59■□□□□ 0.57
SOX1-201ENST00000330949 DYNLRB1Q9NP97 96 aa18.59■□□□□ 0.57
SOX1-201ENST00000330949 CRIP2P52943 208 aaPredicted RBP18.58■□□□□ 0.57
SOX1-201ENST00000330949 TNFRSF18Q9Y5U5 241 aa18.58■□□□□ 0.57
SOX1-201ENST00000330949 Q6ZS46 218 aa18.58■□□□□ 0.56
SOX1-201ENST00000330949 TRPT1Q86TN4 253 aaKnown RBP18.58■□□□□ 0.56
SOX1-201ENST00000330949 RNF182Q8N6D2 247 aa18.58■□□□□ 0.56
SOX1-201ENST00000330949 TRAV8-4A0A0B4J246 113 aa18.57■□□□□ 0.56
SOX1-201ENST00000330949 C11orf86A6NJI1 115 aa18.57■□□□□ 0.56
SOX1-201ENST00000330949 WNK2Q9Y3S1 2297 aa18.57■□□□□ 0.56
SOX1-201ENST00000330949 ATRXP46100 2492 aa18.57■□□□□ 0.56
SOX1-201ENST00000330949 TIMM23O14925 209 aa18.57■□□□□ 0.56
SOX1-201ENST00000330949 P0DMU3 169 aa18.56■□□□□ 0.56
SOX1-201ENST00000330949 FAM231AP0DMU4 169 aa18.56■□□□□ 0.56
SOX1-201ENST00000330949 FAM231CP0DMU5 169 aa18.56■□□□□ 0.56
SOX1-201ENST00000330949 RPL13AP40429 203 aaKnown RBP18.56■□□□□ 0.56
SOX1-201ENST00000330949 AKAP6Q13023 2319 aa18.56■□□□□ 0.56
SOX1-201ENST00000330949 IGHV3-23P01764 117 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 CTSGP08311 255 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 IGFL3Q6UXB1 125 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 C15orf53Q8NAA6 179 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 ODF3Q96PU9 254 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 IGLV4-69A0A075B6H9 119 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 CRYGDP07320 174 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 ARL3P36405 182 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 LINC01600Q96MT4 127 aa18.55■□□□□ 0.56
SOX1-201ENST00000330949 LY6LH3BQJ8 138 aa18.54■□□□□ 0.56
SOX1-201ENST00000330949 IGHV3-33P01772 117 aa18.54■□□□□ 0.56
SOX1-201ENST00000330949 ATXN8Q156A1 80 aa18.54■□□□□ 0.56
SOX1-201ENST00000330949 Q6ZQT7 251 aa18.54■□□□□ 0.56
SOX1-201ENST00000330949 CLEC3BP05452 202 aa18.54■□□□□ 0.56
SOX1-201ENST00000330949 ANKHD1Q8IWZ3 2542 aaKnown RBP18.53■□□□□ 0.56
SOX1-201ENST00000330949 MEIG1Q5JSS6 88 aa18.53■□□□□ 0.56
SOX1-201ENST00000330949 RPL39LQ96EH5 51 aaKnown RBP18.53■□□□□ 0.56
SOX1-201ENST00000330949 DPH3P1Q9H4G8 78 aa18.53■□□□□ 0.56
SOX1-201ENST00000330949 M0R381 172 aa18.52■□□□□ 0.56
SOX1-201ENST00000330949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.52■□□□□ 0.56
SOX1-201ENST00000330949 NPBQ8NG41 125 aa18.52■□□□□ 0.56
SOX1-201ENST00000330949 MSRB2Q9Y3D2 182 aa18.52■□□□□ 0.56
SOX1-201ENST00000330949 IGHV1-69DA0A0B4J2H0 117 aa18.52■□□□□ 0.55
SOX1-201ENST00000330949 MDFICQ9P1T7 246 aa18.52■□□□□ 0.55
SOX1-201ENST00000330949 PPP1R17O96001 155 aa18.51■□□□□ 0.55
SOX1-201ENST00000330949 LINC01620Q4KN68 170 aa18.51■□□□□ 0.55
SOX1-201ENST00000330949 HIF1ANQ9NWT6 349 aa18.51■□□□□ 0.55
SOX1-201ENST00000330949 IGHV3OR16-8A0A075B7F1 116 aa18.51■□□□□ 0.55
SOX1-201ENST00000330949 A4D1N5 150 aa18.51■□□□□ 0.55
SOX1-201ENST00000330949 RNASE6Q93091 150 aaKnown RBP18.51■□□□□ 0.55
SOX1-201ENST00000330949 SPTBN1Q01082 2364 aaKnown RBP18.51■□□□□ 0.55
SOX1-201ENST00000330949 COL6A6A6NMZ7 2263 aa18.51■□□□□ 0.55
SOX1-201ENST00000330949 A0A0B4J2C4 111 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 DUSP14O95147 198 aaKnown RBP18.5■□□□□ 0.55
SOX1-201ENST00000330949 PMVKQ15126 192 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 MRPL23Q16540 153 aaKnown RBP18.5■□□□□ 0.55
SOX1-201ENST00000330949 IGF2RP11717 2491 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 TSPEAR-AS2P59090 65 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 C1orf122Q6ZSJ8 110 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 TEX49A0A1B0GTD5 131 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 BRI3O95415 125 aa18.5■□□□□ 0.55
SOX1-201ENST00000330949 TMEM263Q8WUH6 116 aaKnown RBP18.5■□□□□ 0.55
SOX1-201ENST00000330949 BUB3O43684 328 aa18.49■□□□□ 0.55
SOX1-201ENST00000330949 RNF223E7ERA6 249 aa18.49■□□□□ 0.55
SOX1-201ENST00000330949 EMP1P54849 157 aa18.49■□□□□ 0.55
SOX1-201ENST00000330949 MRPL53Q96EL3 112 aaKnown RBP18.49■□□□□ 0.55
SOX1-201ENST00000330949 TRAV2A0A0B4J234 112 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 LY6HO94772 140 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 H3BMM0 161 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 LGALS3P17931 250 aaKnown RBP18.48■□□□□ 0.55
SOX1-201ENST00000330949 TMEM170BQ5T4T1 132 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 C9orf47Q6ZRZ4 202 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 UBE2WQ96B02 151 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 TMEM126AQ9H061 195 aa18.48■□□□□ 0.55
SOX1-201ENST00000330949 TRBV10-2A0A0K0K1G8 114 aa18.47■□□□□ 0.55
SOX1-201ENST00000330949 E7EQL1 145 aa18.47■□□□□ 0.55
SOX1-201ENST00000330949 J3QQQ9 107 aa18.47■□□□□ 0.55
SOX1-201ENST00000330949 IGHV3-35A0A0C4DH35 117 aa18.47■□□□□ 0.55
SOX1-201ENST00000330949 AMELXQ99217 191 aa18.47■□□□□ 0.55
SOX1-201ENST00000330949 H7C2G1 150 aa18.46■□□□□ 0.55
SOX1-201ENST00000330949 C14orf178Q8N769 122 aaPredicted RBP18.46■□□□□ 0.55
SOX1-201ENST00000330949 LGALS9O00182 355 aa18.46■□□□□ 0.55
SOX1-201ENST00000330949 TSHBP01222 138 aa18.46■□□□□ 0.55
SOX1-201ENST00000330949 Q1RN00 199 aa18.46■□□□□ 0.55
SOX1-201ENST00000330949 PTPRQQ9UMZ3 2332 aa18.46■□□□□ 0.55
SOX1-201ENST00000330949 COL12A1Q99715 3063 aa18.46■□□□□ 0.54
SOX1-201ENST00000330949 MGPP08493 103 aa18.45■□□□□ 0.54
SOX1-201ENST00000330949 TP53TG1Q9Y2A0 90 aa18.45■□□□□ 0.54
SOX1-201ENST00000330949 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.45■□□□□ 0.54
SOX1-201ENST00000330949 IGIPA6NJ69 53 aa18.45■□□□□ 0.54
SOX1-201ENST00000330949 HES1Q14469 280 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms