RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
TPM3-206ENST00000330188 UBE2V1Q13404 147 aa10.89□□□□□ -0.67
TPM3-206ENST00000330188 PSMG4Q5JS54 123 aa10.89□□□□□ -0.67
TPM3-206ENST00000330188 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 A0A087WW49 117 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 PTTG1IPP53801 180 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 SYNJ2BPP57105 145 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 POM121L12Q8N7R1 296 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 IGKV2D-26A0A0A0MRZ7 120 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 C7orf71A4D174 169 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 K7EQG2 157 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 DPM2O94777 84 aa10.88□□□□□ -0.67
TPM3-206ENST00000330188 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 A0A0J9YX75 114 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 LGALS9O00182 355 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
TPM3-206ENST00000330188 ORMDL2Q53FV1 153 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 ERASQ7Z444 233 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 ODF3Q96PU9 254 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
TPM3-206ENST00000330188 KIF25-AS1Q9Y6Z4 181 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
TPM3-206ENST00000330188 SEC11AP67812 179 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 DEFB113Q30KQ7 82 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
TPM3-206ENST00000330188 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
TPM3-206ENST00000330188 ZNF462Q96JM2 2506 aa10.86□□□□□ -0.67
TPM3-206ENST00000330188 A0A087WX48 190 aa10.86□□□□□ -0.67
TPM3-206ENST00000330188 LINC00315P59091 139 aa10.86□□□□□ -0.67
TPM3-206ENST00000330188 Q5PR19 223 aa10.86□□□□□ -0.67
TPM3-206ENST00000330188 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
TPM3-206ENST00000330188 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
TPM3-206ENST00000330188 CBY3A6NI87 242 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 K7EMI3 77 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 CD7P09564 240 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 HOXD3P31249 432 aaPredicted RBP10.85□□□□□ -0.67
TPM3-206ENST00000330188 HSD52Q0P140 79 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 ZC2HC1BQ5TFG8 222 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 TOMM6Q96B49 74 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 PRRC2AP48634 2157 aaKnown RBP10.85□□□□□ -0.67
TPM3-206ENST00000330188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.85□□□□□ -0.67
TPM3-206ENST00000330188 VAMP3Q15836 100 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 GTSCR1Q86UQ5 136 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 TMEM160Q9NX00 188 aa10.85□□□□□ -0.67
TPM3-206ENST00000330188 UBR5O95071 2799 aaPredicted RBP10.85□□□□□ -0.67
TPM3-206ENST00000330188 PPP1R17O96001 155 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 IGKV3-20P01619 116 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 JPT2Q9H910 190 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 USP9YO00507 2555 aaPredicted RBP10.84□□□□□ -0.67
TPM3-206ENST00000330188 FAM208BQ5VWN6 2430 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 ZANQ9Y493 2812 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 TRAV12-2A0A075B6T6 113 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 TTTY13Q9BZ97 58 aa10.84□□□□□ -0.67
TPM3-206ENST00000330188 POLQO75417 2590 aa10.83□□□□□ -0.68
TPM3-206ENST00000330188 ZFYVE26Q68DK2 2539 aa10.83□□□□□ -0.68
TPM3-206ENST00000330188 SCGB3A1Q96QR1 104 aa10.83□□□□□ -0.68
TPM3-206ENST00000330188 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 C9orf85Q96MD7 179 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 Q96MF0 132 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 CSTL1Q9H114 145 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 DOPEY2Q9Y3R5 2298 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 CDKN1BP46527 198 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 C2orf66Q6UXQ4 117 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 C18orf65Q6ZTR6 163 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
TPM3-206ENST00000330188 AGRNO00468 2067 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 H7C1H1 209 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 PLNP26678 52 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 RPL32P62910 135 aaKnown RBP10.81□□□□□ -0.68
TPM3-206ENST00000330188 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 SUMO4Q6EEV6 95 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 Q8N2B8 174 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 NEXN-AS1Q8NBZ9 246 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 HIGD1BQ9P298 99 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 A0A087WWL8 130 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 A6NDN8 102 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 F8VRH5 84 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 DUSP14O95147 198 aaKnown RBP10.81□□□□□ -0.68
TPM3-206ENST00000330188 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
TPM3-206ENST00000330188 SLURP1P55000 103 aa10.8□□□□□ -0.68
TPM3-206ENST00000330188 TCTEX1D4Q5JR98 221 aa10.8□□□□□ -0.68
TPM3-206ENST00000330188 AMMECR1LQ6DCA0 310 aa10.8□□□□□ -0.68
TPM3-206ENST00000330188 FOXI2Q6ZQN5 318 aa10.8□□□□□ -0.68
TPM3-206ENST00000330188 Q8N1Y9 231 aa10.8□□□□□ -0.68
TPM3-206ENST00000330188 IGHV1OR15-1A0A075B7D0 117 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 H3BRM9 83 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 POLR2KP53803 58 aaKnown RBP10.79□□□□□ -0.68
TPM3-206ENST00000330188 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 AMTNQ6UX39 209 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 OR4C5Q8NGB2 326 aa10.79□□□□□ -0.68
TPM3-206ENST00000330188 CHTOPQ9Y3Y2 248 aaKnown RBP10.79□□□□□ -0.68
TPM3-206ENST00000330188 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms