RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 IGLV2-18A0A075B6J9 118 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 TRAV17A0A0B4J275 112 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 A0A0J9YY99 117 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 ENSAO43768 121 aaKnown RBP9.13□□□□□ -0.95
SHMT2-201ENST00000328923 IGLV1-44P01699 117 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 MALP21145 153 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 PRO0628Q9UI54 55 aa9.13□□□□□ -0.95
SHMT2-201ENST00000328923 GCN1Q92616 2671 aaKnown RBP9.13□□□□□ -0.95
SHMT2-201ENST00000328923 IGHV3-33P01772 117 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 TRACP01848 142 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 CNTFRP26992 372 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 WT1-ASQ06250 92 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 PVRIGQ6DKI7 326 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 ADGRG4Q8IZF6 3080 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 RP1L1Q8IWN7 2480 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-201ENST00000328923 ZGRF1Q86YA3 2104 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 PRR25Q96S07 402 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 TMEM14CQ9P0S9 112 aa9.12□□□□□ -0.95
SHMT2-201ENST00000328923 DLX6P56179 175 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 DEFB109BQ30KR1 87 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 BSNQ9UPA5 3926 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 KALRNO60229 2985 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 CGB1A6NKQ9 187 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 E7EUB6 86 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 SH2D1AO60880 128 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 P0DMU3 169 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 LINC00336Q6ZUF6 198 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 KLK15Q9H2R5 256 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
SHMT2-201ENST00000328923 LAGE3Q14657 143 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 SMCR5Q8TEV8 140 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 RELNP78509 3460 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 H7C423 109 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 Q1RN00 199 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 C17orf77Q96MU5 243 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 METTL26Q96S19 204 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 DKK4Q9UBT3 224 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 PLXNB1O43157 2135 aa9.1□□□□□ -0.95
SHMT2-201ENST00000328923 TRAV12-1A0A0B4J245 112 aa9.09□□□□□ -0.95
SHMT2-201ENST00000328923 NSUN5P1Q3KNT7 163 aa9.09□□□□□ -0.95
SHMT2-201ENST00000328923 TMEM258P61165 79 aa9.09□□□□□ -0.95
SHMT2-201ENST00000328923 TMEM263Q8WUH6 116 aaKnown RBP9.09□□□□□ -0.95
SHMT2-201ENST00000328923 EEF1AKMT3Q96AZ1 226 aa9.09□□□□□ -0.95
SHMT2-201ENST00000328923 DSCAMO60469 2012 aa9.09□□□□□ -0.95
SHMT2-201ENST00000328923 IGHV1-18A0A0C4DH31 117 aa9.08□□□□□ -0.96
SHMT2-201ENST00000328923 GAFA1Q96PS6 74 aa9.08□□□□□ -0.96
SHMT2-201ENST00000328923 A0A0G2JNJ9 132 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 RS1O15537 224 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 ATP5G1P05496 136 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 EGR2P11161 476 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-201ENST00000328923 C14orf178Q8N769 122 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-201ENST00000328923 C10orf105Q8TEF2 133 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 Q9UFV3 132 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 ABCA1O95477 2261 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 IGHV3-21A0A0B4J1V1 117 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 TRAV26-2A0A0B4J265 109 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 M0R3E3 92 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 SPRY2O43597 315 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 C10orf55Q5SWW7 151 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 IL17RELQ6ZVW7 336 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
SHMT2-201ENST00000328923 HELZ2Q9BYK8 2649 aaKnown RBP9.07□□□□□ -0.96
SHMT2-201ENST00000328923 TRIAP1O43715 76 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 IGLV2-23P01705 113 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 DEFB121Q5J5C9 76 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 RNF7Q9UBF6 113 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 SLC25A29Q8N8R3 303 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 SCGB3A1Q96QR1 104 aa9.06□□□□□ -0.96
SHMT2-201ENST00000328923 SETXQ7Z333 2677 aaKnown RBP9.06□□□□□ -0.96
SHMT2-201ENST00000328923 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 VMA21Q3ZAQ7 101 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 C8orf31Q8N9H6 132 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 RAI1Q7Z5J4 1906 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-201ENST00000328923 PFN2P35080 140 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 MSMPQ1L6U9 139 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 IGFL3Q6UXB1 125 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 ZNF575Q86XF7 245 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 TMEM86BQ8N661 226 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 CNEP1R1Q8N9A8 125 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 C9orf106Q8NAJ2 232 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 PLCE1Q9P212 2302 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 PTPRQQ9UMZ3 2332 aa9.05□□□□□ -0.96
SHMT2-201ENST00000328923 K7ENP7 123 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 LYZP61626 148 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 FAM27E3Q08E93 113 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 ZNRD1Q9P1U0 126 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 C17orf100A8MU93 164 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
SHMT2-201ENST00000328923 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms