RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 TRPT1Q86TN4 253 aaKnown RBP13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 MRPL53Q96EL3 112 aaKnown RBP13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 TRAV13-1A0A0B4J241 112 aa13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 IGHV3-38A0A0C4DH36 116 aa13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 A0A1W2PPR1 153 aa13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 LINC01549A6NIU2 74 aa13.12□□□□□ -0.31
PPP3CA-201ENST00000323055 CCL24O00175 119 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 SEC11AP67812 179 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 DSCAML1Q8TD84 2053 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 SPXQ9BT56 116 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 LENEPQ9Y5L5 61 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 NPC2P61916 151 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 PRADC1Q9BSG0 188 aa13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 MRPL35Q9NZE8 188 aaKnown RBP13.11□□□□□ -0.31
PPP3CA-201ENST00000323055 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE1Q13065 139 aa13.1□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE4Q13068 117 aa13.1□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE5Q13069 117 aa13.1□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
PPP3CA-201ENST00000323055 ZNF747Q9BV97 191 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE12BA1L429 117 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE7O76087 117 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE12FP0CL80 117 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE12GP0CL81 117 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 GAGE12IP0CL82 117 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 ZNF48Q96MX3 618 aaPredicted RBP13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 DKK2Q9UBU2 259 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 KLF5Q13887 457 aaPredicted RBP13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 RNASE1P07998 156 aaKnown RBP13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 FOXI2Q6ZQN5 318 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
PPP3CA-201ENST00000323055 C19orf71A6NCJ1 209 aa13.08□□□□□ -0.32
PPP3CA-201ENST00000323055 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
PPP3CA-201ENST00000323055 A0A087WX48 190 aa13.08□□□□□ -0.32
PPP3CA-201ENST00000323055 EBI3Q14213 229 aa13.08□□□□□ -0.32
PPP3CA-201ENST00000323055 AZU1P20160 251 aa13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 ZNF479Q96JC4 524 aa13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 RHODO00212 210 aa13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 WFDC11Q8NEX6 87 aa13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 RPL39LQ96EH5 51 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-201ENST00000323055 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 A8MWV9 139 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 ZNF843Q8N446 348 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 COPS9Q8WXC6 57 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 MEGF9Q9H1U4 602 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 CHAC1Q9BUX1 264 aa13.06□□□□□ -0.32
PPP3CA-201ENST00000323055 C11orf68Q9H3H3 251 aaKnown RBP13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 C10orf99Q6UWK7 81 aa13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 LGALS9BQ3B8N2 356 aa13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 LGALS9CQ6DKI2 356 aa13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 GPHB5Q86YW7 130 aa13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 TSSC4Q9Y5U2 329 aaPredicted RBP13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 ADAMTS20P59510 1910 aa13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 LOXL1Q08397 574 aaPredicted RBP13.05□□□□□ -0.32
PPP3CA-201ENST00000323055 DLEU1O43261 78 aa13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 ESDP10768 282 aa13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 I3L3M4 83 aa13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 ZNF625Q96I27 306 aaPredicted RBP13.04□□□□□ -0.32
PPP3CA-201ENST00000323055 MALP21145 153 aa13.03□□□□□ -0.32
PPP3CA-201ENST00000323055 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
PPP3CA-201ENST00000323055 K7EMT4 169 aa13.02□□□□□ -0.32
PPP3CA-201ENST00000323055 PMVKQ15126 192 aa13.02□□□□□ -0.32
PPP3CA-201ENST00000323055 GDF5OSQ5U4N7 250 aa13.02□□□□□ -0.32
PPP3CA-201ENST00000323055 CFAP161Q6P656 301 aa13.02□□□□□ -0.32
PPP3CA-201ENST00000323055 TMEM61Q8N0U2 210 aa13.02□□□□□ -0.32
PPP3CA-201ENST00000323055 IGF1P05019 195 aa13.02□□□□□ -0.33
PPP3CA-201ENST00000323055 FLNBO75369 2602 aaKnown RBP13.02□□□□□ -0.33
PPP3CA-201ENST00000323055 MGAQ8IWI9 3026 aa13.02□□□□□ -0.33
PPP3CA-201ENST00000323055 CENPEQ02224 2701 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 C20orf78Q9BR46 151 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 DNAL4O96015 105 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 HIST2H2BDQ6DRA6 164 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 TIMM21Q9BVV7 248 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 TRBV7-9A0A0J9YWB2 115 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 F8VRH5 84 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 IGHV4-31P0DP07 118 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 DEFB121Q5J5C9 76 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 U3KQE9 123 aa13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 ANKRD17O75179 2603 aaKnown RBP13.01□□□□□ -0.33
PPP3CA-201ENST00000323055 Q8N1Y9 231 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
PPP3CA-201ENST00000323055 VPS13AQ96RL7 3174 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 COX8AP10176 69 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 Q6ZS46 218 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 Q8N6K4 173 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 IGHG4P01861 327 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 LINC00158P58513 81 aa13□□□□□ -0.33
PPP3CA-201ENST00000323055 TMEM238C9JI98 176 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms