RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 UNC80Q8N2C7 3258 aa12.05□□□□□ -0.48
GCFC2-201ENST00000321027 K7ERJ3 54 aa12.05□□□□□ -0.48
GCFC2-201ENST00000321027 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
GCFC2-201ENST00000321027 KLF12Q9Y4X4 402 aa12.05□□□□□ -0.48
GCFC2-201ENST00000321027 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 CFHR3Q02985 330 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 GDF5OSQ5U4N7 250 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
GCFC2-201ENST00000321027 IGLV1-47P01700 117 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 GHRHP01286 108 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 K7EP13 123 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 GAGE4Q13068 117 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 GAGE5Q13069 117 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 LAMTOR3Q9UHA4 124 aa12.04□□□□□ -0.48
GCFC2-201ENST00000321027 FOXE3Q13461 319 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 DEFB125Q8N687 156 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 TTTY13Q9BZ97 58 aa12.03□□□□□ -0.48
GCFC2-201ENST00000321027 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.48
GCFC2-201ENST00000321027 F6UB75 175 aa12.02□□□□□ -0.49
GCFC2-201ENST00000321027 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
GCFC2-201ENST00000321027 C1QTNF4Q9BXJ3 329 aa12.02□□□□□ -0.49
GCFC2-201ENST00000321027 PMVKQ15126 192 aa12.02□□□□□ -0.49
GCFC2-201ENST00000321027 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
GCFC2-201ENST00000321027 ATG2AQ2TAZ0 1938 aa12.02□□□□□ -0.49
GCFC2-201ENST00000321027 CMC4P56277 68 aaPredicted RBP12.02□□□□□ -0.49
GCFC2-201ENST00000321027 CFHR4Q92496 578 aa12.02□□□□□ -0.49
GCFC2-201ENST00000321027 AMTNQ6UX39 209 aa12.01□□□□□ -0.49
GCFC2-201ENST00000321027 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
GCFC2-201ENST00000321027 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
GCFC2-201ENST00000321027 CTSGP08311 255 aa12.01□□□□□ -0.49
GCFC2-201ENST00000321027 IGHV1OR15-1A0A075B7D0 117 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 F8VRH5 84 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 LEPROTO15243 131 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
GCFC2-201ENST00000321027 LINC01545Q5VT33 79 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 TNRC6AQ8NDV7 1962 aaKnown RBP12□□□□□ -0.49
GCFC2-201ENST00000321027 INS-IGF2F8WCM5 200 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 IGLV11-55A0A075B6I3 123 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 IGHV7-81A0A0B4J1V7 117 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 LGALS1P09382 135 aaKnown RBP12□□□□□ -0.49
GCFC2-201ENST00000321027 PFN2P35080 140 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 Q8N7P7 452 aa12□□□□□ -0.49
GCFC2-201ENST00000321027 PRAC2D3DTV9 90 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 RHODO00212 210 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 CRYGCP07315 174 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 OR11H6Q8NGC7 330 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 CDKN1BP46527 198 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 C19orf71A6NCJ1 209 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 K7EMI3 77 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 NDUFA4O00483 81 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 ZNRF2Q8NHG8 242 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 RNF114Q9Y508 228 aa11.99□□□□□ -0.49
GCFC2-201ENST00000321027 A0A1W2PPM0 123 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 K7EP34 96 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 PRB1P04280 392 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 ABCA12Q86UK0 2595 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 DNAH14Q0VDD8 3507 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 H3BMG7 143 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 GAGE2AQ6NT46 116 aa11.98□□□□□ -0.49
GCFC2-201ENST00000321027 TSSC4Q9Y5U2 329 aaPredicted RBP11.98□□□□□ -0.49
GCFC2-201ENST00000321027 RNASE13Q5GAN3 156 aaKnown RBP11.97□□□□□ -0.49
GCFC2-201ENST00000321027 IGHV4-61A0A0C4DH41 118 aa11.97□□□□□ -0.49
GCFC2-201ENST00000321027 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
GCFC2-201ENST00000321027 FBXL19-AS1Q494R0 122 aa11.97□□□□□ -0.49
GCFC2-201ENST00000321027 LOXL1Q08397 574 aaPredicted RBP11.97□□□□□ -0.49
GCFC2-201ENST00000321027 SCRT2Q9NQ03 307 aa11.97□□□□□ -0.49
GCFC2-201ENST00000321027 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
GCFC2-201ENST00000321027 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
GCFC2-201ENST00000321027 I3L3M4 83 aa11.97□□□□□ -0.49
GCFC2-201ENST00000321027 GNRH2O43555 120 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 GAGE7O76087 117 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 GATA3P23771 443 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 FGF6P10767 208 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 CPAMD8Q8IZJ3 1885 aa11.96□□□□□ -0.49
GCFC2-201ENST00000321027 HLA-DRB4P13762 266 aa11.96□□□□□ -0.5
GCFC2-201ENST00000321027 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.5
GCFC2-201ENST00000321027 HLA-DRB4X5D2U9 266 aa11.96□□□□□ -0.5
GCFC2-201ENST00000321027 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
GCFC2-201ENST00000321027 TAX1BP3O14907 124 aa11.95□□□□□ -0.5
GCFC2-201ENST00000321027 MLST8Q9BVC4 326 aa11.95□□□□□ -0.5
GCFC2-201ENST00000321027 SS18Q15532 418 aa11.95□□□□□ -0.5
GCFC2-201ENST00000321027 TMEM141Q96I45 108 aa11.95□□□□□ -0.5
GCFC2-201ENST00000321027 BUB3O43684 328 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 NXPH4O95158 308 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 DEFB1P60022 68 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 PKD1L2Q7Z442 2459 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 DSCAMO60469 2012 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 NPBQ8NG41 125 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
GCFC2-201ENST00000321027 AZU1P20160 251 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms