RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 OR11H1Q8NG94 326 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 FOXC2Q99958 501 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 PHLDA3Q9Y5J5 127 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 NF1P21359 2839 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 IGHV4-4A0A075B6R2 117 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 TRBV7-9A0A0J9YWB2 115 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 M0R143 59 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 CACNG7P62955 275 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 TCTEX1D4Q5JR98 221 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 APRG1Q8IVJ8 170 aa5.67□□□□□ -1.5
IFT88-201ENST00000319980 SETD2Q9BYW2 2564 aaPredicted RBP5.66□□□□□ -1.5
IFT88-201ENST00000319980 TRAV12-3A0A0B4J271 114 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 A0A1B0GV90 55 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 KLLNB2CW77 178 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 K7EQG2 157 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 Q6ZN92 141 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 MTORP42345 2549 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 hDV102S1A0JD36 115 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 HBDP02042 147 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 LBHQ53QV2 105 aaPredicted RBP5.66□□□□□ -1.5
IFT88-201ENST00000319980 FAM159AQ6UWV7 190 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 DPF1Q92782 380 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 LAMTOR2Q9Y2Q5 125 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 CUBNO60494 3623 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 NOTCH2Q04721 2471 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 TRAV12-2A0A075B6T6 113 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 A0A0J9YX75 114 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 DNAJC9-AS1A6NH13 148 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 RNASE3P12724 160 aaKnown RBP5.66□□□□□ -1.5
IFT88-201ENST00000319980 ADAMTSL5Q6ZMM2 481 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 Q6ZSV7 163 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
IFT88-201ENST00000319980 C11orf44Q8N8P7 122 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 OR2K2Q8NGT1 345 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 C2orf88Q9BSF0 95 aa5.66□□□□□ -1.5
IFT88-201ENST00000319980 LINC01619G3V211 115 aa5.65□□□□□ -1.5
IFT88-201ENST00000319980 BATFQ16520 125 aa5.65□□□□□ -1.5
IFT88-201ENST00000319980 TEX29Q8N6K0 151 aa5.65□□□□□ -1.5
IFT88-201ENST00000319980 NXT2Q9NPJ8 142 aaKnown RBP5.65□□□□□ -1.5
IFT88-201ENST00000319980 LEPP41159 167 aa5.65□□□□□ -1.51
IFT88-201ENST00000319980 LINC01545Q5VT33 79 aa5.65□□□□□ -1.51
IFT88-201ENST00000319980 TMEM86BQ8N661 226 aa5.65□□□□□ -1.51
IFT88-201ENST00000319980 KLHL30-AS1Q8NEE0 82 aa5.65□□□□□ -1.51
IFT88-201ENST00000319980 C18orf15Q96N68 181 aa5.65□□□□□ -1.51
IFT88-201ENST00000319980 ESM1Q9NQ30 184 aa5.65□□□□□ -1.51
IFT88-201ENST00000319980 HSBP1L1C9JCN9 74 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 CD7P09564 240 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 HNRNPA3P51991 378 aaKnown RBP5.64□□□□□ -1.51
IFT88-201ENST00000319980 SPINK13Q1W4C9 94 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 NRACQ8N912 160 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 OR1N2Q8NGR9 330 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 C4orf3Q8WVX3 66 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 SCRT2Q9NQ03 307 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 YAE1D1Q9NRH1 226 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 TNP2Q05952 138 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 OR9G4Q8NGQ1 327 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 DLX4Q92988 240 aaPredicted RBP5.64□□□□□ -1.51
IFT88-201ENST00000319980 IFI27L1Q96BM0 104 aa5.64□□□□□ -1.51
IFT88-201ENST00000319980 C7orf71A4D174 169 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 CDKN1BP46527 198 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 PEMTQ9UBM1 199 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 TP73-AS1Q9UF72 201 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 TCAPO15273 167 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 MGPP08493 103 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 TSPOP30536 169 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 KRTAP1-1Q07627 177 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 Q8N8P6 123 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 DPH3P1Q9H4G8 78 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 IGLV2-18A0A075B6J9 118 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 A0A1W2PRX2 142 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 MED14OSP0DP75 135 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 FCER1GP30273 86 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 DEFB131AP59861 70 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 TMEM61Q8N0U2 210 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 TMEM158Q8WZ71 300 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 MRAP2Q96G30 205 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 AP1S3Q96PC3 154 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 ST20Q9HBF5 79 aa5.63□□□□□ -1.51
IFT88-201ENST00000319980 WNK1Q9H4A3 2382 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 AGRNO00468 2067 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 FOXI2Q6ZQN5 318 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 ODF3Q96PU9 254 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 JPT2Q9H910 190 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 MDFICQ9P1T7 246 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 GOLT1BQ9Y3E0 138 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 KNCNA6PVL3 124 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 CD5LO43866 347 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 DUSP14O95147 198 aaKnown RBP5.62□□□□□ -1.51
IFT88-201ENST00000319980 MALP21145 153 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 ZNF124Q15973 351 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 Q8N1Y9 231 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 RASL10AQ92737 203 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 RPL39LQ96EH5 51 aaKnown RBP5.62□□□□□ -1.51
IFT88-201ENST00000319980 OTOGQ6ZRI0 2925 aa5.62□□□□□ -1.51
IFT88-201ENST00000319980 SMIM17P0DL12 118 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 HTN1P15515 57 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 TCTAP57738 103 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 LAGE3Q14657 143 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms