RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 MUC3AQ02505 3323 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 PAX2Q02962 417 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 MSRB1Q9NZV6 116 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 TET2Q6N021 2002 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 K7EP13 123 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 Q0VG73 95 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 GPHB5Q86YW7 130 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 OR11H2Q8NH07 326 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 OR13C6PQ8NH95 151 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 MRAP2Q96G30 205 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 NDUFAF3Q9BU61 184 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 TNFRSF6BO95407 300 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 GTSF1Q8WW33 167 aa7.12□□□□□ -1.27
TMEM39A-201ENST00000319172 IGHV1OR15-1A0A075B7D0 117 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 J3QR89 54 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 OR2K2Q8NGT1 345 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 IGLV2-8P01709 118 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 CRPP02741 224 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 PRADC1Q9BSG0 188 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 RNASE1P07998 156 aaKnown RBP7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 RPL36AP83881 106 aaKnown RBP7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 RPL36ALQ969Q0 106 aaKnown RBP7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 CITED1Q99966 193 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 MALP21145 153 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 CFHR3Q02985 330 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 RAB37Q96AX2 223 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 CSTL1Q9H114 145 aa7.11□□□□□ -1.27
TMEM39A-201ENST00000319172 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 LYRM7Q5U5X0 104 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 TMEM61Q8N0U2 210 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 TMEM158Q8WZ71 300 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 HIST1H4GQ99525 98 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 HELZ2Q9BYK8 2649 aaKnown RBP7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 LAGE3Q14657 143 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 GTF2H5Q6ZYL4 71 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 DLX4Q92988 240 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 SMR3AQ99954 134 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 MGAM2Q2M2H8 2515 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 RBAKDNA6NC62 111 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 INAFM1C9JVW0 142 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 K7EMT4 169 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 NPYP01303 97 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 ORMDL2Q53FV1 153 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
TMEM39A-201ENST00000319172 F5H768 121 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 CD28P10747 220 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 MRGPRG-AS1Q2M3A8 158 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 Q6ZSV7 163 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 NEGR1Q7Z3B1 354 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 CD300EQ496F6 205 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 IGSF10Q6WRI0 2623 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 NUPR1O60356 82 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 GATA1P15976 413 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 ZNF80P51504 273 aaPredicted RBP7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 FOXI2Q6ZQN5 318 aa7.09□□□□□ -1.27
TMEM39A-201ENST00000319172 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 PHLDA1Q8WV24 401 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 SMAD5-AS1Q9Y6J3 95 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 A0A0U1RRA0 63 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 hDV102S1A0JD36 115 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 PIFOQ8TCI5 191 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 TMEM89A2RUT3 159 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 CD5LO43866 347 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 Q6ZWC4 215 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 A6NDN8 102 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 SYS1-DBNDD2H3BUS1 97 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 RPL24P83731 157 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 LENEPQ9Y5L5 61 aa7.08□□□□□ -1.28
TMEM39A-201ENST00000319172 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 COX6CP09669 75 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 DAD1P61803 113 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 SIGLEC8Q9NYZ4 499 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 H3BRM9 83 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 C18orf65Q6ZTR6 163 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 ZNF702PQ9H963 129 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 ATMQ13315 3056 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 NBEAQ8NFP9 2946 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 FLNAP21333 2647 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 A0A087X0K7 114 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 TMEM86BQ8N661 226 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 SPAG8Q99932 426 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE12BA1L429 117 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 VCYO14598 125 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 PSCAO43653 123 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE7O76087 117 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE12FP0CL80 117 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE12GP0CL81 117 aa7.06□□□□□ -1.28
TMEM39A-201ENST00000319172 GAGE12IP0CL82 117 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms