RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 KRTAP4-5Q9BYR2 181 aa10.69□□□□□ -0.7
FOXR1-201ENST00000317011 FBLL1A6NHQ2 334 aaKnown RBP10.68□□□□□ -0.7
FOXR1-201ENST00000317011 CDK2AP2O75956 126 aa10.68□□□□□ -0.7
FOXR1-201ENST00000317011 SLAQ13239 276 aa10.68□□□□□ -0.7
FOXR1-201ENST00000317011 FHL2Q14192 279 aa10.68□□□□□ -0.7
FOXR1-201ENST00000317011 TMEM183BQ1AE95 376 aa10.68□□□□□ -0.7
FOXR1-201ENST00000317011 LINC00862A6NCI5 91 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 C16orf90A8MZG2 172 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 S100A9P06702 114 aaKnown RBP10.67□□□□□ -0.7
FOXR1-201ENST00000317011 CENPWQ5EE01 88 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 RASL10AQ92737 203 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 TVP23CQ96ET8 276 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 C8orf49Q96NF6 230 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 PARLQ9H300 379 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
FOXR1-201ENST00000317011 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 PAX4O43316 350 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 LTAP01374 205 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 CRYBA4P53673 196 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 SMDT1Q9H4I9 107 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 HHLA3Q9XRX5 114 aa10.66□□□□□ -0.7
FOXR1-201ENST00000317011 NDUFS6O75380 124 aaKnown RBP10.65□□□□□ -0.7
FOXR1-201ENST00000317011 GNG4P50150 75 aa10.65□□□□□ -0.7
FOXR1-201ENST00000317011 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
FOXR1-201ENST00000317011 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.7
FOXR1-201ENST00000317011 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
FOXR1-201ENST00000317011 MRPL16Q9NX20 251 aaKnown RBP10.65□□□□□ -0.7
FOXR1-201ENST00000317011 TRBV20OR9-2A0A075B6H5 130 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 PGPEP1LA6NFU8 196 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 SFTA3P0C7M3 94 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 SMIM7Q9BQ49 75 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 SPXQ9BT56 116 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 ZFP30Q9Y2G7 519 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
FOXR1-201ENST00000317011 ZNF727A8MUV8 499 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 SIVA1O15304 175 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 GCGP01275 180 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 MRPL23Q16540 153 aaKnown RBP10.63□□□□□ -0.71
FOXR1-201ENST00000317011 SMUG1Q53HV7 270 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 SPATA12Q7Z6I5 190 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
FOXR1-201ENST00000317011 C9JCJ5 164 aa10.62□□□□□ -0.71
FOXR1-201ENST00000317011 MGST1P10620 155 aaKnown RBP10.62□□□□□ -0.71
FOXR1-201ENST00000317011 ZNF80P51504 273 aaPredicted RBP10.62□□□□□ -0.71
FOXR1-201ENST00000317011 KRTAP10-2P60368 255 aa10.62□□□□□ -0.71
FOXR1-201ENST00000317011 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
FOXR1-201ENST00000317011 PRR27Q6MZM9 219 aa10.62□□□□□ -0.71
FOXR1-201ENST00000317011 TMEM183AQ8IXX5 376 aa10.62□□□□□ -0.71
FOXR1-201ENST00000317011 NXPH4O95158 308 aa10.61□□□□□ -0.71
FOXR1-201ENST00000317011 LINC00315P59091 139 aa10.61□□□□□ -0.71
FOXR1-201ENST00000317011 FAM159AQ6UWV7 190 aa10.61□□□□□ -0.71
FOXR1-201ENST00000317011 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
FOXR1-201ENST00000317011 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
FOXR1-201ENST00000317011 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
FOXR1-201ENST00000317011 GNRH2O43555 120 aa10.6□□□□□ -0.71
FOXR1-201ENST00000317011 IGLV2-8P01709 118 aa10.6□□□□□ -0.71
FOXR1-201ENST00000317011 MLST8Q9BVC4 326 aa10.6□□□□□ -0.71
FOXR1-201ENST00000317011 NAGKQ9UJ70 344 aa10.6□□□□□ -0.71
FOXR1-201ENST00000317011 TRAV21A0A0B4J279 112 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 K7EQD1 137 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
FOXR1-201ENST00000317011 FAM74A3Q4VXF1 159 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 SLC7A5P1Q8MH63 180 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 SMIM12Q96EX1 92 aa10.59□□□□□ -0.71
FOXR1-201ENST00000317011 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 K7EN84 100 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 K7EP13 123 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 SH2D1AO60880 128 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 CRIP1P50238 77 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 TMEM241Q24JQ0 296 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 FAM162BQ5T6X4 162 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 OCC1Q8TAD7 63 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 NAT8Q9UHE5 227 aa10.58□□□□□ -0.72
FOXR1-201ENST00000317011 M0R2P5 195 aa10.57□□□□□ -0.72
FOXR1-201ENST00000317011 ORM1P02763 201 aa10.57□□□□□ -0.72
FOXR1-201ENST00000317011 ADCYAP1P18509 176 aa10.57□□□□□ -0.72
FOXR1-201ENST00000317011 ADIRFQ15847 76 aa10.57□□□□□ -0.72
FOXR1-201ENST00000317011 LINC01551Q86U37 167 aa10.57□□□□□ -0.72
FOXR1-201ENST00000317011 TNFRSF18Q9Y5U5 241 aa10.57□□□□□ -0.72
FOXR1-201ENST00000317011 FABP5P3A8MUU1 101 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 F8W036 122 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 M0R036 132 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 TYMSP04818 313 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
FOXR1-201ENST00000317011 GYPEP15421 78 aa10.55□□□□□ -0.72
FOXR1-201ENST00000317011 TIRAPP58753 221 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms