RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PPDPFLQ8WWR9 84 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 GAGE7O76087 117 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 CRYGCP07315 174 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 PLA2G5P39877 138 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 ANKRD39Q53RE8 183 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 LAMTOR3Q9UHA4 124 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 CGB3P0DN86 165 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 CGB7P0DN87 165 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
SPAST-201ENST00000315285 ZNF503Q96F45 646 aa10.71□□□□□ -0.69
SPAST-201ENST00000315285 H3BMM0 161 aa10.71□□□□□ -0.7
SPAST-201ENST00000315285 Q8N7P7 452 aa10.71□□□□□ -0.7
SPAST-201ENST00000315285 UBE2WQ96B02 151 aa10.71□□□□□ -0.7
SPAST-201ENST00000315285 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.7
SPAST-201ENST00000315285 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.7
SPAST-201ENST00000315285 IGHV4-38-2P0DP08 117 aa10.7□□□□□ -0.7
SPAST-201ENST00000315285 HIST1H4AP62805 103 aaKnown RBP10.7□□□□□ -0.7
SPAST-201ENST00000315285 RHOHQ15669 191 aa10.7□□□□□ -0.7
SPAST-201ENST00000315285 BLCAPP62952 87 aa10.7□□□□□ -0.7
SPAST-201ENST00000315285 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
SPAST-201ENST00000315285 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
SPAST-201ENST00000315285 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
SPAST-201ENST00000315285 RNASE13Q5GAN3 156 aaKnown RBP10.7□□□□□ -0.7
SPAST-201ENST00000315285 CSPG4Q6UVK1 2322 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 ADORA2A-AS1P86434 159 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 NOTCH2Q04721 2471 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 IGKV1D-37A0A075B6S9 117 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 PFN2P35080 140 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 UTF1Q5T230 341 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 C16orf54Q6UWD8 224 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 SCRT2Q9NQ03 307 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
SPAST-201ENST00000315285 GAGE6Q13070 117 aa10.68□□□□□ -0.7
SPAST-201ENST00000315285 C5orf56Q8N8D9 126 aa10.68□□□□□ -0.7
SPAST-201ENST00000315285 LINC00574Q9H8X3 128 aa10.68□□□□□ -0.7
SPAST-201ENST00000315285 CCL25O15444 150 aa10.68□□□□□ -0.7
SPAST-201ENST00000315285 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
SPAST-201ENST00000315285 IGHV4-30-2A0A087WSY4 118 aa10.67□□□□□ -0.7
SPAST-201ENST00000315285 ZFP36P26651 326 aaKnown RBP10.67□□□□□ -0.7
SPAST-201ENST00000315285 HERVK_113P63121 156 aa10.67□□□□□ -0.7
SPAST-201ENST00000315285 OTOGLQ3ZCN5 2332 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 CTRLP40313 264 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 EIF4EBP1Q13541 118 aaPredicted RBP10.66□□□□□ -0.7
SPAST-201ENST00000315285 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 MUC22E2RYF6 1773 aaPredicted RBP10.66□□□□□ -0.7
SPAST-201ENST00000315285 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 SUMO4Q6EEV6 95 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 DAD1P61803 113 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 WNK1Q9H4A3 2382 aa10.66□□□□□ -0.7
SPAST-201ENST00000315285 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
SPAST-201ENST00000315285 F5H768 121 aa10.65□□□□□ -0.7
SPAST-201ENST00000315285 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
SPAST-201ENST00000315285 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
SPAST-201ENST00000315285 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.7
SPAST-201ENST00000315285 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.7
SPAST-201ENST00000315285 Q8NA96 180 aa10.65□□□□□ -0.7
SPAST-201ENST00000315285 GAGE12HA6NDE8 117 aa10.65□□□□□ -0.71
SPAST-201ENST00000315285 U3KQE9 123 aa10.65□□□□□ -0.71
SPAST-201ENST00000315285 ZNF48Q96MX3 618 aaPredicted RBP10.64□□□□□ -0.71
SPAST-201ENST00000315285 FBXL19-AS1Q494R0 122 aa10.64□□□□□ -0.71
SPAST-201ENST00000315285 ZFP2Q6ZN57 461 aa10.64□□□□□ -0.71
SPAST-201ENST00000315285 C10orf105Q8TEF2 133 aa10.64□□□□□ -0.71
SPAST-201ENST00000315285 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
SPAST-201ENST00000315285 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
SPAST-201ENST00000315285 NUP210LQ5VU65 1888 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 A0A1B0GXF2 115 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 CFC1P0CG37 223 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 WDR87Q6ZQQ6 2873 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 TTTY13Q9BZ97 58 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 SIRPDQ9H106 197 aa10.63□□□□□ -0.71
SPAST-201ENST00000315285 NXPH4O95158 308 aa10.62□□□□□ -0.71
SPAST-201ENST00000315285 SLURP1P55000 103 aa10.62□□□□□ -0.71
SPAST-201ENST00000315285 IGLL5B9A064 214 aa10.62□□□□□ -0.71
SPAST-201ENST00000315285 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
SPAST-201ENST00000315285 CARD19Q96LW7 228 aa10.62□□□□□ -0.71
SPAST-201ENST00000315285 C22orf34Q6ZV56 151 aa10.62□□□□□ -0.71
SPAST-201ENST00000315285 SOCS3O14543 225 aa10.61□□□□□ -0.71
SPAST-201ENST00000315285 NOP10Q9NPE3 64 aaKnown RBP10.61□□□□□ -0.71
SPAST-201ENST00000315285 ATRXP46100 2492 aa10.61□□□□□ -0.71
SPAST-201ENST00000315285 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
SPAST-201ENST00000315285 SPANXA1Q9NS26 97 aa10.61□□□□□ -0.71
SPAST-201ENST00000315285 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
SPAST-201ENST00000315285 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
SPAST-201ENST00000315285 FXYD2P54710 66 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
SPAST-201ENST00000315285 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 DEFB1P60022 68 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 YPEL4Q96NS1 127 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 TRAV13-2A0A0B4J235 113 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms