RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 CCL25O15444 150 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 NUDT3O95989 172 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 C12orf54Q6X4T0 127 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 TRAV21A0A0B4J279 112 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 ELANEP08246 267 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 BVES-AS1Q5T3Y7 98 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 UBE2E2Q96LR5 201 aa8.6□□□□□ -1.03
FNDC9-201ENST00000312349 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
FNDC9-201ENST00000312349 PLA2G2AP14555 144 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 NRACQ8N912 160 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 KLLNB2CW77 178 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 COX8AP10176 69 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 Q8N2B8 174 aa8.59□□□□□ -1.03
FNDC9-201ENST00000312349 IGLV2-18A0A075B6J9 118 aa8.58□□□□□ -1.04
FNDC9-201ENST00000312349 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
FNDC9-201ENST00000312349 K7EQG2 157 aa8.58□□□□□ -1.04
FNDC9-201ENST00000312349 DPF1Q92782 380 aa8.58□□□□□ -1.04
FNDC9-201ENST00000312349 C18orf15Q96N68 181 aa8.58□□□□□ -1.04
FNDC9-201ENST00000312349 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
FNDC9-201ENST00000312349 HBDP02042 147 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 PPBPP02775 128 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 TCTAP57738 103 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 LGALS9BQ3B8N2 356 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 DEFB125Q8N687 156 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
FNDC9-201ENST00000312349 OR2K2Q8NGT1 345 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 ESM1Q9NQ30 184 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 S100A4P26447 101 aaKnown RBP8.57□□□□□ -1.04
FNDC9-201ENST00000312349 ID1P41134 155 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 LEPP41159 167 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 ASIPP42127 132 aa8.57□□□□□ -1.04
FNDC9-201ENST00000312349 A0A0J9YX75 114 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 LGALS9O00182 355 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 TAX1BP3O14907 124 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 CACNG7P62955 275 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 JPT2Q9H910 190 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 SETXQ7Z333 2677 aaKnown RBP8.56□□□□□ -1.04
FNDC9-201ENST00000312349 DNAJC9-AS1A6NH13 148 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 Q6ZSV7 163 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 OR11H1Q8NG94 326 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 OR1N2Q8NGR9 330 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
FNDC9-201ENST00000312349 PHLDA3Q9Y5J5 127 aa8.56□□□□□ -1.04
FNDC9-201ENST00000312349 VAMP3Q15836 100 aa8.55□□□□□ -1.04
FNDC9-201ENST00000312349 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
FNDC9-201ENST00000312349 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
FNDC9-201ENST00000312349 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
FNDC9-201ENST00000312349 CBY1Q9Y3M2 126 aa8.55□□□□□ -1.04
FNDC9-201ENST00000312349 TRBV7-9A0A0J9YWB2 115 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 CD5LO43866 347 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 SNRPD3P62318 126 aaKnown RBP8.54□□□□□ -1.04
FNDC9-201ENST00000312349 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 RASL10AQ92737 203 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 Q8N8P6 123 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 DEFB104AQ8WTQ1 72 aa8.54□□□□□ -1.04
FNDC9-201ENST00000312349 JMJD1CQ15652 2540 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 NOTCH2Q04721 2471 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 C7orf71A4D174 169 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 J3QKU1 62 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 MGPP08493 103 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 CD7P09564 240 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 FGF6P10767 208 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 DLX4Q92988 240 aaPredicted RBP8.53□□□□□ -1.04
FNDC9-201ENST00000312349 NXT2Q9NPJ8 142 aaKnown RBP8.53□□□□□ -1.04
FNDC9-201ENST00000312349 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 K7EP13 123 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 RBMY1A1P0DJD3 496 aaKnown RBP8.53□□□□□ -1.04
FNDC9-201ENST00000312349 RBMY1CP0DJD4 496 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 FCER1GP30273 86 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 RBMY1FQ15415 496 aaKnown RBP8.53□□□□□ -1.04
FNDC9-201ENST00000312349 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 KLHL30-AS1Q8NEE0 82 aa8.53□□□□□ -1.04
FNDC9-201ENST00000312349 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 LINC01619G3V211 115 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 PRM2P04554 102 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 LINC00315P59091 139 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 TMEM97Q5BJF2 176 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 AMTNQ6UX39 209 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 BOD1L2Q8IYS8 172 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 TMEM61Q8N0U2 210 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 C4orf3Q8WVX3 66 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 KIF25-AS1Q9Y6Z4 181 aa8.52□□□□□ -1.05
FNDC9-201ENST00000312349 A0A087WWL8 130 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms