RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SNCGO76070 127 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 CYBAP13498 195 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 CNBPP62633 177 aaKnown RBP0.79□□□□□ -2.28
CEP290-201ENST00000309041 KHDC3LQ587J8 217 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 ZNF720Q7Z2F6 126 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 SLC35E3Q7Z769 313 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 LINC00615Q96LM1 132 aaPredicted RBP0.79□□□□□ -2.28
CEP290-201ENST00000309041 NMNAT3Q96T66 252 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 HIST1H2BLQ99880 126 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 LINC00470Q9BZP3 86 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 PLXNB2O15031 1838 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 PIKFYVEQ9Y2I7 2098 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 TRBV6-7A0A0A0MS04 114 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 IGKV1D-13A0A0B4J2D9 117 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 KNCNA6PVL3 124 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 ZNF724A8MTY0 619 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 F8W1H4 67 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 LYNX1G3V0Z9 82 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 J3QLW9 94 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 IGKV1-13P0DP09 117 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 RND2P52198 227 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 LCN8Q6JVE9 175 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 FAM216BQ8N7L0 139 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 RFESDQ8TAC1 157 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 TIMM10BQ9Y5J6 103 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 GTF3C1Q12789 2109 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 SCN1AP35498 2009 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 CEP192Q8TEP8 1941 aa0.79□□□□□ -2.28
CEP290-201ENST00000309041 PYYP10082 97 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF823P16415 610 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 LAMTOR4Q0VGL1 99 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF833PQ6ZTB9 187 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 FAM218AQ96MZ4 157 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 PRELID3AQ96N28 172 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 TMEM38BQ9NVV0 291 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 DOCK4Q8N1I0 1966 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 FXYD6-FXYD2A0A087WZ82 144 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 A0A096LNT2 108 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 TCRBV4S1A1TA0A5B7 111 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 PLAC8L1A1L4L8 177 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ETV2O00321 342 aaPredicted RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 CD28P10747 220 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 Q6ZTI0 123 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 FAM19A4Q96LR4 140 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 XIRP2A4UGR9 3374 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 VCANP13611 3396 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 A0A1W2PQD3 144 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 BBIP1A8MTZ0 92 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 PDCD5O14737 125 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 HBDP02042 147 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 IGKV1-16P04430 117 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 SIX1Q15475 284 aaPredicted RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 LCE4AQ5TA78 99 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 Q8N9L7 120 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ANKRD36A6QL64 1941 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 TEX48A0A1B0GUV7 120 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 C5orf58C9J3I9 102 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 H3BMM0 161 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 TMEM170BQ5T4T1 132 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 C9orf66Q5T8R8 295 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 C16orf47Q6ZP98 133 aaPredicted RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF771Q7L3S4 317 aaPredicted RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 RNASE6Q93091 150 aaKnown RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 TP53AIP1Q9HCN2 124 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 CITO14578 2027 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 CABIN1Q9Y6J0 2220 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 SMG1Q96Q15 3661 aaKnown RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 C9orf92A6NGG3 77 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 H3BUA1 57 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 SLC25A4P12235 298 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF14P17017 642 aaPredicted RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 FKBP2P26885 142 aaKnown RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 SSR2P43308 183 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 BVES-AS1Q5T3Y7 98 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 HES3Q5TGS1 186 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 Q6ZT83 130 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF329Q86UD4 541 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZCCHC24Q8N2G6 241 aaKnown RBP0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF383Q8NA42 475 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ZNF563Q8TA94 476 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 KLK15Q9H2R5 256 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 PRNDQ9UKY0 176 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 MUC17Q685J3 4493 aa0.78□□□□□ -2.28
CEP290-201ENST00000309041 ARHGAP21Q5T5U3 1957 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 MYOFQ9NZM1 2061 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 NUMA1Q14980 2115 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 A0A0C4DFX4 3053 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 PTPRSQ13332 1948 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 LRRK1Q38SD2 2015 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 C9JCJ5 164 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 RER1O15258 196 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 MT-ND4LP03901 98 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 KRTAP13-3Q3SY46 172 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 ZNF595Q8IYB9 648 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 POM121L12Q8N7R1 296 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 DCANP1Q8TF63 244 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 C3orf14Q9HBI5 128 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 IDI2-AS1Q9NZ38 188 aa0.78□□□□□ -2.29
CEP290-201ENST00000309041 ASPMQ8IZT6 3477 aa0.78□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms