RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PLA2G2AP14555 144 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 WDR86Q86TI4 376 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 RNF222A6NCQ9 220 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 TNFRSF13BO14836 293 aaPredicted RBP6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 ATP5G1P05496 136 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 MBD6Q96DN6 1003 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 ZNF493Q6ZR52 646 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 SEM1Q6ZVN7 128 aa6.58□□□□□ -1.36
PCDHB1-201ENST00000306549 IGLL5B9A064 214 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 XCL1P47992 114 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 HERV-K104P63124 156 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 IGFL4Q6B9Z1 124 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 CLPSL2Q6UWE3 100 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 IGKV1D-8A0A087WSZ0 117 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 RSPO1Q2MKA7 263 aaPredicted RBP6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 ZNF492Q9P255 531 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 C9JQL5 133 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 F8W735 103 aaPredicted RBP6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 K7EM74 188 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 Q5BKY6 102 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 KIR2DL5BQ8NHK3 375 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 A0A0J9YY99 117 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 K7EMT4 169 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 SMKR1H3BMG3 65 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 TRACP01848 142 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 NTF4P34130 210 aa6.57□□□□□ -1.36
PCDHB1-201ENST00000306549 ORMDL1Q9P0S3 153 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 TRAV3A0A0B4J244 114 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 K7EMI3 77 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 SHISA2Q6UWI4 295 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 UBE2CO00762 179 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 SPINK8P0C7L1 97 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 BOD1L2Q8IYS8 172 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 C4orf3Q8WVX3 66 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BKO60814 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BJP06899 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BOP23527 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BBP33778 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BDP58876 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BCP62807 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST2H2BEQ16778 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BHQ93079 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BNQ99877 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BMQ99879 126 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 NDUFA11Q86Y39 141 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 C8orf49Q96NF6 230 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 C5orf47Q569G3 176 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 C20orf144Q9BQM9 153 aa6.56□□□□□ -1.36
PCDHB1-201ENST00000306549 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 GRNP28799 593 aaKnown RBP6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 BTCP35070 178 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 ZNRD1Q9P1U0 126 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 HELZ2Q9BYK8 2649 aaKnown RBP6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 G3V318 75 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 A0A087X0K7 114 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 IGHG2P01859 326 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 BAALCQ8WXS3 180 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 C5orf56Q8N8D9 126 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 B9D2Q9BPU9 175 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 LINC00574Q9H8X3 128 aa6.55□□□□□ -1.36
PCDHB1-201ENST00000306549 hDV102S1A0JD36 115 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 COX7A2LO14548 114 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 PRB4P10163 310 aaPredicted RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 C9orf47Q6ZRZ4 202 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 C11orf53Q8IXP5 236 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 A0A1B0GX51 115 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 H0YIZ8 118 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 RBM3P98179 157 aaKnown RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 C1orf147Q96MC9 270 aaPredicted RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 ZNF503-AS2A6NEH8 195 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 K7ERS5 55 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 FGF6P10767 208 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 FAM104BQ5XKR9 115 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 Q6ZQT7 251 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 IL15RAQ13261 267 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 MRPL52Q86TS9 123 aaKnown RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 DAZ2Q13117 558 aaKnown RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 DAZ4Q86SG3 579 aaKnown RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 RNF183Q96D59 192 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 DAZ3Q9NR90 486 aaKnown RBP6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 U3KQE9 123 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 VSIRQ9H7M9 311 aa6.54□□□□□ -1.36
PCDHB1-201ENST00000306549 TRBV19A0A075B6N1 114 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 GYPEP15421 78 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 PPDPFLQ8WWR9 84 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms