RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 EP300Q09472 2414 aaPredicted RBP9.99□□□□□ -0.81
COL3A1-201ENST00000304636 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 Q6ZPA2 131 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 CRIP3Q6Q6R5 217 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 DSCR8Q96T75 97 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 IGHV7-81A0A0B4J1V7 117 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 MRPL36Q9P0J6 103 aaKnown RBP9.98□□□□□ -0.81
COL3A1-201ENST00000304636 NXPH4O95158 308 aa9.98□□□□□ -0.81
COL3A1-201ENST00000304636 SPRY2O43597 315 aa9.98□□□□□ -0.81
COL3A1-201ENST00000304636 TINCRA0A1B0GVN0 87 aa9.98□□□□□ -0.81
COL3A1-201ENST00000304636 DOCK10Q96BY6 2186 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 E7EUB6 86 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 CRYGCP07315 174 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 ELANEP08246 267 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 IGFL2Q6UWQ7 119 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 NCOR1O75376 2440 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 OBSL1O75147 1896 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
COL3A1-201ENST00000304636 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
COL3A1-201ENST00000304636 C16orf54Q6UWD8 224 aa9.97□□□□□ -0.81
COL3A1-201ENST00000304636 A0A0J9YXV3 536 aa9.96□□□□□ -0.81
COL3A1-201ENST00000304636 CENPVL3A0A0U1RRI6 287 aa9.96□□□□□ -0.81
COL3A1-201ENST00000304636 MED14OSP0DP75 135 aa9.96□□□□□ -0.81
COL3A1-201ENST00000304636 TIMM17AQ99595 171 aa9.96□□□□□ -0.81
COL3A1-201ENST00000304636 ORMDL1Q9P0S3 153 aa9.96□□□□□ -0.81
COL3A1-201ENST00000304636 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.81
COL3A1-201ENST00000304636 GDF5OSQ5U4N7 250 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 PIFOQ8TCI5 191 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 PRAC2D3DTV9 90 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 BRWD1-AS2P59051 145 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 DKK4Q9UBT3 224 aa9.96□□□□□ -0.82
COL3A1-201ENST00000304636 IGKV1D-37A0A075B6S9 117 aa9.95□□□□□ -0.82
COL3A1-201ENST00000304636 A0A0B4J2C4 111 aa9.95□□□□□ -0.82
COL3A1-201ENST00000304636 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
COL3A1-201ENST00000304636 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 J3QLI3 93 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 IGLV1-47P01700 117 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 PLA2G5P39877 138 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 MBD6Q96DN6 1003 aa9.94□□□□□ -0.82
COL3A1-201ENST00000304636 H0YGX0 51 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 U3KQE9 123 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 RS1O15537 224 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 LOXL1Q08397 574 aaPredicted RBP9.93□□□□□ -0.82
COL3A1-201ENST00000304636 MLST8Q9BVC4 326 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 ATOX1O00244 68 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
COL3A1-201ENST00000304636 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
COL3A1-201ENST00000304636 H3BT86 120 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 TRAV25A0A0B4J276 109 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 RBM3P98179 157 aaKnown RBP9.93□□□□□ -0.82
COL3A1-201ENST00000304636 RNF114Q9Y508 228 aa9.93□□□□□ -0.82
COL3A1-201ENST00000304636 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 PSCAO43653 123 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 PROP1O75360 226 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 DAD1P61803 113 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 EIF4EBP1Q13541 118 aaPredicted RBP9.92□□□□□ -0.82
COL3A1-201ENST00000304636 RNF152Q8N8N0 203 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
COL3A1-201ENST00000304636 Q8N9W7 124 aa9.91□□□□□ -0.82
COL3A1-201ENST00000304636 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
COL3A1-201ENST00000304636 NDUFA11Q86Y39 141 aa9.91□□□□□ -0.82
COL3A1-201ENST00000304636 MALRD1Q5VYJ5 2156 aa9.91□□□□□ -0.82
COL3A1-201ENST00000304636 ACACAQ13085 2346 aa9.91□□□□□ -0.82
COL3A1-201ENST00000304636 USF3Q68DE3 2245 aa9.9□□□□□ -0.82
COL3A1-201ENST00000304636 F5H768 121 aa9.9□□□□□ -0.82
COL3A1-201ENST00000304636 NKAPP1Q8N9T2 125 aa9.9□□□□□ -0.82
COL3A1-201ENST00000304636 CADP27708 2225 aa9.9□□□□□ -0.82
COL3A1-201ENST00000304636 HOXD3P31249 432 aaPredicted RBP9.9□□□□□ -0.82
COL3A1-201ENST00000304636 LINC00574Q9H8X3 128 aa9.9□□□□□ -0.82
COL3A1-201ENST00000304636 Q71RC1 249 aaPredicted RBP9.9□□□□□ -0.82
COL3A1-201ENST00000304636 LGALS9O00182 355 aa9.9□□□□□ -0.83
COL3A1-201ENST00000304636 TMEM258P61165 79 aa9.9□□□□□ -0.83
COL3A1-201ENST00000304636 RBX1P62877 108 aa9.9□□□□□ -0.83
COL3A1-201ENST00000304636 CGB3P0DN86 165 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 CGB7P0DN87 165 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 PIP4P1Q86T03 277 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 AJUBAQ96IF1 538 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 ARFGEF3Q5TH69 2177 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 TM2D2Q9BX73 214 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 GPR179Q6PRD1 2367 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 NCKAP5O14513 1909 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 PTH2Q96A98 100 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
COL3A1-201ENST00000304636 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
COL3A1-201ENST00000304636 KIAA1549LQ6ZVL6 1849 aa9.88□□□□□ -0.83
COL3A1-201ENST00000304636 J3KT08 172 aa9.88□□□□□ -0.83
COL3A1-201ENST00000304636 ANGP03950 147 aaKnown RBP9.88□□□□□ -0.83
COL3A1-201ENST00000304636 C5orf47Q569G3 176 aa9.88□□□□□ -0.83
COL3A1-201ENST00000304636 PRB1P04280 392 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms