RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 PCP2Q8IVA1 136 aa13.99□□□□□ -0.17
RNF139-201ENST00000303545 IGHV4OR15-8A0A075B7B6 117 aa13.99□□□□□ -0.17
RNF139-201ENST00000303545 A0A087WW49 117 aa13.99□□□□□ -0.17
RNF139-201ENST00000303545 RNASE3P12724 160 aaKnown RBP13.99□□□□□ -0.17
RNF139-201ENST00000303545 DEFB136Q30KP8 78 aa13.99□□□□□ -0.17
RNF139-201ENST00000303545 TTTY13Q9BZ97 58 aa13.99□□□□□ -0.17
RNF139-201ENST00000303545 JPT2Q9H910 190 aa13.99□□□□□ -0.17
RNF139-201ENST00000303545 C7orf71A4D174 169 aa13.98□□□□□ -0.17
RNF139-201ENST00000303545 CBY3A6NI87 242 aa13.98□□□□□ -0.17
RNF139-201ENST00000303545 Q5PR19 223 aa13.98□□□□□ -0.17
RNF139-201ENST00000303545 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
RNF139-201ENST00000303545 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
RNF139-201ENST00000303545 FGF6P10767 208 aa13.98□□□□□ -0.17
RNF139-201ENST00000303545 LINC01546A6NGU7 62 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 ID1P41134 155 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 UBE2V1Q13404 147 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 LAGE3Q14657 143 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 PRRC2AP48634 2157 aaKnown RBP13.97□□□□□ -0.17
RNF139-201ENST00000303545 K7EMT4 169 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 ODF1Q14990 250 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 NEGR1Q7Z3B1 354 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 RASL10AQ92737 203 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 NF1P21359 2839 aa13.97□□□□□ -0.17
RNF139-201ENST00000303545 J3QLI3 93 aa13.96□□□□□ -0.17
RNF139-201ENST00000303545 ZNF702PQ9H963 129 aa13.96□□□□□ -0.17
RNF139-201ENST00000303545 Q96MF0 132 aa13.96□□□□□ -0.17
RNF139-201ENST00000303545 AKAP9Q99996 3911 aa13.96□□□□□ -0.18
RNF139-201ENST00000303545 Q6YL49 198 aa13.95□□□□□ -0.18
RNF139-201ENST00000303545 DPF1Q92782 380 aa13.95□□□□□ -0.18
RNF139-201ENST00000303545 DUX3Q96PT4 197 aa13.95□□□□□ -0.18
RNF139-201ENST00000303545 IGKV2D-26A0A0A0MRZ7 120 aa13.95□□□□□ -0.18
RNF139-201ENST00000303545 CCDC168Q8NDH2 2452 aa13.95□□□□□ -0.18
RNF139-201ENST00000303545 CD7P09564 240 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 HIST2H2BCQ6DN03 193 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 FAM159AQ6UWV7 190 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 GTSCR1Q86UQ5 136 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 DPH3P1Q9H4G8 78 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 TMEM160Q9NX00 188 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 TENM4Q6N022 2769 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 HOXD3P31249 432 aaPredicted RBP13.94□□□□□ -0.18
RNF139-201ENST00000303545 SMIM2Q9BVW6 85 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 A0A087WWL8 130 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 TAX1BP3O14907 124 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 C12orf54Q6X4T0 127 aa13.94□□□□□ -0.18
RNF139-201ENST00000303545 ITPR3Q14573 2671 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 KLLNB2CW77 178 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 K7EP13 123 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 DEFB113Q30KQ7 82 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 MYOZ3Q8TDC0 251 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 MRAP2Q96G30 205 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 SLURP1P55000 103 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 SPINK13Q1W4C9 94 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 APRG1Q8IVJ8 170 aa13.93□□□□□ -0.18
RNF139-201ENST00000303545 LGALS1P09382 135 aaKnown RBP13.92□□□□□ -0.18
RNF139-201ENST00000303545 SUMO2P61956 95 aaKnown RBP13.92□□□□□ -0.18
RNF139-201ENST00000303545 MRPL35Q9NZE8 188 aaKnown RBP13.92□□□□□ -0.18
RNF139-201ENST00000303545 ZNF580Q9UK33 172 aa13.92□□□□□ -0.18
RNF139-201ENST00000303545 IGKCP01834 107 aa13.92□□□□□ -0.18
RNF139-201ENST00000303545 BOD1L2Q8IYS8 172 aa13.92□□□□□ -0.18
RNF139-201ENST00000303545 OR1N2Q8NGR9 330 aa13.92□□□□□ -0.18
RNF139-201ENST00000303545 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
RNF139-201ENST00000303545 VAMP3Q15836 100 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 CHD6Q8TD26 2715 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 FSHBP01225 129 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 CDKN1BP46527 198 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 TMEM97Q5BJF2 176 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 KHDC1LQ5JSQ8 128 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 AP1S3Q96PC3 154 aa13.91□□□□□ -0.18
RNF139-201ENST00000303545 SNRPD3P62318 126 aaKnown RBP13.9□□□□□ -0.18
RNF139-201ENST00000303545 MDFICQ9P1T7 246 aa13.9□□□□□ -0.18
RNF139-201ENST00000303545 ZC2HC1BQ5TFG8 222 aa13.9□□□□□ -0.18
RNF139-201ENST00000303545 FAM74A4Q5TZK3 123 aa13.9□□□□□ -0.18
RNF139-201ENST00000303545 DEFB125Q8N687 156 aa13.9□□□□□ -0.18
RNF139-201ENST00000303545 A0A0J9YX75 114 aa13.89□□□□□ -0.19
RNF139-201ENST00000303545 PRSS47A8MTI9 375 aa13.89□□□□□ -0.19
RNF139-201ENST00000303545 F5H697 171 aa13.89□□□□□ -0.19
RNF139-201ENST00000303545 K7EQG2 157 aa13.89□□□□□ -0.19
RNF139-201ENST00000303545 OR4C5Q8NGB2 326 aa13.89□□□□□ -0.19
RNF139-201ENST00000303545 ZMAT4Q9H898 229 aa13.89□□□□□ -0.19
RNF139-201ENST00000303545 DPM2O94777 84 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 HTN1P15515 57 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 ADAMTSL5Q6ZMM2 481 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 NAA38Q9BRA0 125 aaKnown RBP13.88□□□□□ -0.19
RNF139-201ENST00000303545 CSTL1Q9H114 145 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 SETD2Q9BYW2 2564 aaPredicted RBP13.88□□□□□ -0.19
RNF139-201ENST00000303545 ATP5LO75964 103 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 COTL1Q14019 142 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 TCTEX1D4Q5JR98 221 aa13.88□□□□□ -0.19
RNF139-201ENST00000303545 FLNAP21333 2647 aaKnown RBP13.87□□□□□ -0.19
RNF139-201ENST00000303545 SCGB3A1Q96QR1 104 aa13.87□□□□□ -0.19
RNF139-201ENST00000303545 KNCNA6PVL3 124 aa13.87□□□□□ -0.19
RNF139-201ENST00000303545 ELANEP08246 267 aa13.87□□□□□ -0.19
RNF139-201ENST00000303545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.86□□□□□ -0.19
RNF139-201ENST00000303545 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 WNK1Q9H4A3 2382 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 TRBV7-9A0A0J9YWB2 115 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 TMEM89A2RUT3 159 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 PRM2P04554 102 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 LINC00315P59091 139 aa13.86□□□□□ -0.19
RNF139-201ENST00000303545 RNF151Q2KHN1 245 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms