RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ZNF625Q96I27 306 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 GAGE2AQ6NT46 116 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 DNAJC30Q96LL9 226 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 SMIM2Q9BVW6 85 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 GNRH2O43555 120 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 PYY3Q5JQD4 70 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 NAV3Q8IVL0 2385 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 TRAV26-2A0A0B4J265 109 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 KLF5Q13887 457 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 ADCYAP1P18509 176 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 C22orf34Q6ZV56 151 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 C20orf78Q9BR46 151 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 SMIM27A0A1W2PRY6 76 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 C10orf142B7Z368 130 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 CCL18P55774 89 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 NKAPP1Q8N9T2 125 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 C18orf32Q8TCD1 76 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 ADAMTSL5Q6ZMM2 481 aa13.74□□□□□ -0.21
CDC42EP3-201ENST00000295324 NDUFS6O75380 124 aaKnown RBP13.73□□□□□ -0.21
CDC42EP3-201ENST00000295324 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
CDC42EP3-201ENST00000295324 ODF3BA8MYP8 253 aa13.72□□□□□ -0.21
CDC42EP3-201ENST00000295324 SH2D6Q7Z4S9 175 aa13.72□□□□□ -0.21
CDC42EP3-201ENST00000295324 INAFM1C9JVW0 142 aa13.72□□□□□ -0.21
CDC42EP3-201ENST00000295324 IGKV2D-24A0A075B6R9 120 aa13.72□□□□□ -0.21
CDC42EP3-201ENST00000295324 C9JAW5 83 aa13.72□□□□□ -0.21
CDC42EP3-201ENST00000295324 Q6YL49 198 aa13.71□□□□□ -0.21
CDC42EP3-201ENST00000295324 EGR2P11161 476 aaPredicted RBP13.71□□□□□ -0.21
CDC42EP3-201ENST00000295324 NEGR1Q7Z3B1 354 aa13.71□□□□□ -0.21
CDC42EP3-201ENST00000295324 ZNF664Q8N3J9 261 aa13.71□□□□□ -0.22
CDC42EP3-201ENST00000295324 LINC00574Q9H8X3 128 aa13.71□□□□□ -0.22
CDC42EP3-201ENST00000295324 COX11Q9Y6N1 276 aa13.71□□□□□ -0.22
CDC42EP3-201ENST00000295324 NCOA6Q14686 2063 aaPredicted RBP13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 KLF12Q9Y4X4 402 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 EP400Q96L91 3159 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 IGKV1OR2-108A0A075B7D4 117 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 CFHR4Q92496 578 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 TNCP24821 2201 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 WI2-2373I1.2A0A1W2PRP0 233 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 PFN2P35080 140 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 ICOSQ9Y6W8 199 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 PIEZO2Q9H5I5 2752 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 HIST2H2BCQ6DN03 193 aa13.7□□□□□ -0.22
CDC42EP3-201ENST00000295324 WNK1Q9H4A3 2382 aa13.69□□□□□ -0.22
CDC42EP3-201ENST00000295324 DYSFO75923 2080 aa13.69□□□□□ -0.22
CDC42EP3-201ENST00000295324 C9orf153Q5TBE3 101 aa13.69□□□□□ -0.22
CDC42EP3-201ENST00000295324 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
CDC42EP3-201ENST00000295324 DSCAMO60469 2012 aa13.69□□□□□ -0.22
CDC42EP3-201ENST00000295324 KIAA1549LQ6ZVL6 1849 aa13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 TLN1Q9Y490 2541 aaKnown RBP13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 PATE2Q6UY27 113 aa13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 C11orf71Q6IPW1 123 aa13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 NPYP01303 97 aa13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 IGHG4P01861 327 aa13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 HERVK_113P63121 156 aa13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
CDC42EP3-201ENST00000295324 C1orf43Q9BWL3 253 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 SPANXA1Q9NS26 97 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 Q9HAA7 133 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 H3BMM0 161 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 RPL32P62910 135 aaKnown RBP13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 UBE2WQ96B02 151 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 PRSS29PA6NIE9 313 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 CLPSL2Q6UWE3 100 aa13.67□□□□□ -0.22
CDC42EP3-201ENST00000295324 TMEM61Q8N0U2 210 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 GYPEP15421 78 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 CITED1Q99966 193 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 SIGLEC8Q9NYZ4 499 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 KLK5Q9Y337 293 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 ABCA2Q9BZC7 2435 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 PLA2G2AP14555 144 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 DEFB135Q30KP9 77 aa13.66□□□□□ -0.22
CDC42EP3-201ENST00000295324 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
CDC42EP3-201ENST00000295324 ATP6V0E2Q8NHE4 81 aa13.65□□□□□ -0.22
CDC42EP3-201ENST00000295324 PKIGQ9Y2B9 76 aa13.65□□□□□ -0.22
CDC42EP3-201ENST00000295324 NXPH4O95158 308 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 Q6ZQT7 251 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 K7EMI3 77 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 CEP192Q8TEP8 1941 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 PRR14LQ5THK1 2151 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 E7EUB6 86 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 IGLV2-14P01704 120 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
CDC42EP3-201ENST00000295324 IGF1P05019 195 aa13.63□□□□□ -0.23
CDC42EP3-201ENST00000295324 SHISA2Q6UWI4 295 aa13.63□□□□□ -0.23
CDC42EP3-201ENST00000295324 STPG4Q8N801 248 aa13.63□□□□□ -0.23
CDC42EP3-201ENST00000295324 CRLF1O75462 422 aa13.63□□□□□ -0.23
CDC42EP3-201ENST00000295324 SOCS3O14543 225 aa13.63□□□□□ -0.23
CDC42EP3-201ENST00000295324 NDUFA12Q9UI09 145 aa13.63□□□□□ -0.23
CDC42EP3-201ENST00000295324 C20orf144Q9BQM9 153 aa13.62□□□□□ -0.23
CDC42EP3-201ENST00000295324 CHD3Q12873 2000 aaKnown RBP13.62□□□□□ -0.23
CDC42EP3-201ENST00000295324 RBMY1FQ15415 496 aaKnown RBP13.62□□□□□ -0.23
CDC42EP3-201ENST00000295324 C9orf47Q6ZRZ4 202 aa13.62□□□□□ -0.23
CDC42EP3-201ENST00000295324 POLR3KQ9Y2Y1 108 aaPredicted RBP13.62□□□□□ -0.23
CDC42EP3-201ENST00000295324 K7EQD1 137 aa13.62□□□□□ -0.23
CDC42EP3-201ENST00000295324 XCL1P47992 114 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 MORN5Q5VZ52 161 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
CDC42EP3-201ENST00000295324 F8W735 103 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms