RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 AZU1P20160 251 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 EDN2P20800 178 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 BLCAPP62952 87 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 TOMM6Q96B49 74 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 HLA-DRB4X5D2U9 266 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 PLNP26678 52 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 MUC4Q99102 2169 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 FAM19A4Q96LR4 140 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 SPOCK3Q9BQ16 436 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 TRAV12-1A0A0B4J245 112 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 PF4V1P10720 104 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 RNASE3P12724 160 aaKnown RBP12.7□□□□□ -0.38
CHRNE-201ENST00000293780 ORMDL2Q53FV1 153 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 NEXN-AS1Q8NBZ9 246 aa12.7□□□□□ -0.38
CHRNE-201ENST00000293780 H3BUX3 64 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 WFDC12Q8WWY7 111 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 SIGMAR1Q99720 223 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 IGSF10Q6WRI0 2623 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 SMAGPQ0VAQ4 97 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 C20orf78Q9BR46 151 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
CHRNE-201ENST00000293780 C2orf66Q6UXQ4 117 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 HIST1H4GQ99525 98 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 SPG11Q96JI7 2443 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 IGLL5B9A064 214 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 IGHG2P01859 326 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 GNLYP22749 145 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 BAALCQ8WXS3 180 aa12.68□□□□□ -0.38
CHRNE-201ENST00000293780 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
CHRNE-201ENST00000293780 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
CHRNE-201ENST00000293780 CELSR2Q9HCU4 2923 aa12.67□□□□□ -0.38
CHRNE-201ENST00000293780 WFDC2Q14508 124 aa12.67□□□□□ -0.38
CHRNE-201ENST00000293780 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
CHRNE-201ENST00000293780 JPT2Q9H910 190 aa12.67□□□□□ -0.38
CHRNE-201ENST00000293780 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.66□□□□□ -0.38
CHRNE-201ENST00000293780 E9PLD3 99 aa12.66□□□□□ -0.38
CHRNE-201ENST00000293780 CFAP46Q8IYW2 2715 aa12.66□□□□□ -0.38
CHRNE-201ENST00000293780 TRBV7-3A0A075B6L6 115 aa12.66□□□□□ -0.38
CHRNE-201ENST00000293780 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
CHRNE-201ENST00000293780 PRSS29PA6NIE9 313 aa12.66□□□□□ -0.38
CHRNE-201ENST00000293780 SCGB1A1P11684 91 aa12.66□□□□□ -0.38
CHRNE-201ENST00000293780 SPANXB1Q9NS25 103 aaPredicted RBP12.66□□□□□ -0.38
CHRNE-201ENST00000293780 GAGE12HA6NDE8 117 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 A6NDX4 124 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 OR11H12B2RN74 326 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 SLC25A16P16260 332 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
CHRNE-201ENST00000293780 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 OR11H1Q8NG94 326 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 CRYBG3Q68DQ2 2970 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 F8W1H4 67 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 TAL2Q16559 108 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 FOXI2Q6ZQN5 318 aa12.65□□□□□ -0.38
CHRNE-201ENST00000293780 LINC00315P59091 139 aa12.64□□□□□ -0.39
CHRNE-201ENST00000293780 PIMREGQ9BSJ6 248 aa12.64□□□□□ -0.39
CHRNE-201ENST00000293780 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
CHRNE-201ENST00000293780 DUSP14O95147 198 aaKnown RBP12.64□□□□□ -0.39
CHRNE-201ENST00000293780 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
CHRNE-201ENST00000293780 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
CHRNE-201ENST00000293780 ZFYVE26Q68DK2 2539 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 H3BMG7 143 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 PRB1P04280 392 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 MED14OSP0DP75 135 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 J3QR89 54 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
CHRNE-201ENST00000293780 TMEM95Q3KNT9 176 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
CHRNE-201ENST00000293780 H3BUA1 57 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 CRYGDP07320 174 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 IGHV4-30-2A0A087WSY4 118 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 A0A087WWL8 130 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 TSHBP01222 138 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 EMP1P54849 157 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 ETDBQ3ZM63 59 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 C10orf105Q8TEF2 133 aa12.62□□□□□ -0.39
CHRNE-201ENST00000293780 BBC3Q96PG8 261 aaPredicted RBP12.62□□□□□ -0.39
CHRNE-201ENST00000293780 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
CHRNE-201ENST00000293780 KLLNB2CW77 178 aa12.61□□□□□ -0.39
CHRNE-201ENST00000293780 BRI3O95415 125 aa12.61□□□□□ -0.39
CHRNE-201ENST00000293780 POM121L12Q8N7R1 296 aa12.61□□□□□ -0.39
CHRNE-201ENST00000293780 PLEKHB2Q96CS7 222 aa12.61□□□□□ -0.39
CHRNE-201ENST00000293780 CCL19Q99731 98 aa12.61□□□□□ -0.39
CHRNE-201ENST00000293780 SPAG8Q99932 426 aaPredicted RBP12.61□□□□□ -0.39
CHRNE-201ENST00000293780 CSMD2Q7Z408 3487 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 EPG5Q9HCE0 2579 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 TRAV12-3A0A0B4J271 114 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 AVPP01185 164 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 FAM159AQ6UWV7 190 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 MTURNQ8N3F0 131 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 KLHL30-AS1Q8NEE0 82 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 NXPH4O95158 308 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 SUMO4Q6EEV6 95 aa12.6□□□□□ -0.39
CHRNE-201ENST00000293780 SPATA25Q9BR10 227 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms