RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 IGHV1-46P01743 117 aa7.5□□□□□ -1.21
HMBOX1-201ENST00000287701 ELANEP08246 267 aa7.5□□□□□ -1.21
HMBOX1-201ENST00000287701 DEFB127Q9H1M4 99 aa7.5□□□□□ -1.21
HMBOX1-201ENST00000287701 SMAD5-AS1Q9Y6J3 95 aa7.5□□□□□ -1.21
HMBOX1-201ENST00000287701 LOC400499M0QZD8 3231 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 LGALS3P17931 250 aaKnown RBP7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 DEFB108BQ8NET1 73 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 MRPL53Q96EL3 112 aaKnown RBP7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 TMEM223A0PJW6 202 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 TRIAP1O43715 76 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 DYNAPQ8N1N2 210 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 TRAV17A0A0B4J275 112 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 TSHBP01222 138 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 EMP1P54849 157 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 GFRALQ6UXV0 394 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 C5orf38Q86SI9 138 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 KLK15Q9H2R5 256 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 UBTD1Q9HAC8 227 aa7.49□□□□□ -1.21
HMBOX1-201ENST00000287701 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 COX6CP09669 75 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 CNTFRP26992 372 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 MFAP4P55083 255 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 URB1O60287 2271 aaKnown RBP7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 LST1O00453 97 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 APELAP0DMC3 54 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 MUSTN1Q8IVN3 82 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 CACNA1AO00555 2505 aa7.48□□□□□ -1.21
HMBOX1-201ENST00000287701 PRB4P10163 310 aaPredicted RBP7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 HIST1H4AP62805 103 aaKnown RBP7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 Q1RN00 199 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 C3orf56Q8N813 242 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 AGPAT4-IT1Q9H0P7 198 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 COL27A1Q8IZC6 1860 aaPredicted RBP7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 MRAPQ8TCY5 172 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 C2orf48Q96LS8 159 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 ICOSQ9Y6W8 199 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 IGHV1-8P0DP01 117 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 C14orf178Q8N769 122 aaPredicted RBP7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 CNEP1R1Q8N9A8 125 aa7.47□□□□□ -1.21
HMBOX1-201ENST00000287701 IGHV1-3A0A0C4DH29 117 aa7.46□□□□□ -1.22
HMBOX1-201ENST00000287701 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
HMBOX1-201ENST00000287701 TMEM258P61165 79 aa7.46□□□□□ -1.22
HMBOX1-201ENST00000287701 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
HMBOX1-201ENST00000287701 IGLV11-55A0A075B6I3 123 aa7.46□□□□□ -1.22
HMBOX1-201ENST00000287701 LENEPQ9Y5L5 61 aa7.46□□□□□ -1.22
HMBOX1-201ENST00000287701 IGLV1-47P01700 117 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 C9orf47Q6ZRZ4 202 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 DUX3Q96PT4 197 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 IGHV4OR15-8A0A075B7B6 117 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 A0A087WW49 117 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 IGHV3-72A0A0B4J1Y9 119 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 NDUFB3O43676 98 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 CEMP1Q6PRD7 247 aaPredicted RBP7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 LINC00527Q9UJ94 153 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 MSRB2Q9Y3D2 182 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 ATOX1O00244 68 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 IGHV1-69P01742 117 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 DLX1P56177 255 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 GPHB5Q86YW7 130 aa7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 ZNF256Q9Y2P7 627 aaPredicted RBP7.45□□□□□ -1.22
HMBOX1-201ENST00000287701 PRAC2D3DTV9 90 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 OVOL1O14753 267 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 C9orf106Q8NAJ2 232 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 DCANP1Q8TF63 244 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 DNAJC13O75165 2243 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 ZNF22P17026 224 aaPredicted RBP7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 LOXP28300 417 aaPredicted RBP7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 PEMTQ9UBM1 199 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 KAAG1Q9UBP8 84 aa7.44□□□□□ -1.22
HMBOX1-201ENST00000287701 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 CACNA1EQ15878 2313 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 H7C2G1 150 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 INTS1Q8N201 2190 aaKnown RBP7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 BUB1B-PAK6H3BSN5 160 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 M0R1B8 84 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 EDA2RQ9HAV5 297 aa7.43□□□□□ -1.22
HMBOX1-201ENST00000287701 TRACP01848 142 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 UBE2E1P51965 193 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 DPH3Q96FX2 82 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 LITAFQ99732 161 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 ZNF292O60281 2723 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 A0A0J9YXY3 114 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 NXPH4O95158 308 aa7.42□□□□□ -1.22
HMBOX1-201ENST00000287701 IGFL4Q6B9Z1 124 aa7.41□□□□□ -1.22
HMBOX1-201ENST00000287701 NUP37Q8NFH4 326 aa7.41□□□□□ -1.22
HMBOX1-201ENST00000287701 NPBQ8NG41 125 aa7.41□□□□□ -1.22
HMBOX1-201ENST00000287701 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
HMBOX1-201ENST00000287701 TMEM178BH3BS89 294 aa7.41□□□□□ -1.22
HMBOX1-201ENST00000287701 VCYO14598 125 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms