RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 H7C1H1 209 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 THBDP07204 575 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 CCL3L1P16619 93 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 ADORA2A-AS1P86434 159 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 CT83Q5H943 113 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 WDR31Q8NA23 367 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 SIGLEC9Q9Y336 463 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 E7EQL1 145 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 LGALS1P09382 135 aaKnown RBP6.6□□□□□ -1.35
LDB3-201ENST00000263066 ZNF497Q6ZNH5 498 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 ZNF843Q8N446 348 aa6.6□□□□□ -1.35
LDB3-201ENST00000263066 CRYGSP22914 178 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 NPC2P61916 151 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 COL5A1P20908 1838 aaPredicted RBP6.59□□□□□ -1.35
LDB3-201ENST00000263066 MGAM2Q2M2H8 2515 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 BAHCC1Q9P281 2608 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 MGPP08493 103 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 EDN2P20800 178 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 S100A4P26447 101 aaKnown RBP6.59□□□□□ -1.35
LDB3-201ENST00000263066 HLA-DMBP28068 263 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 DUTP33316 252 aaKnown RBP6.59□□□□□ -1.35
LDB3-201ENST00000263066 HIST1H4AP62805 103 aaKnown RBP6.59□□□□□ -1.35
LDB3-201ENST00000263066 IL17RELQ6ZVW7 336 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 IGKV3D-15A0A087WSY6 115 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 C15orf61A6NNL5 157 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 RNF223E7ERA6 249 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 TIMM23O14925 209 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 CNTFRP26992 372 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 LINC01620Q4KN68 170 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 RASL10AQ92737 203 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 OTORQ9NRC9 128 aa6.59□□□□□ -1.35
LDB3-201ENST00000263066 A0A1B0GX51 115 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 C17orf100A8MU93 164 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.58□□□□□ -1.36
LDB3-201ENST00000263066 CD69Q07108 199 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 ZNF714Q96N38 554 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 PRORYQ9H606 182 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 LAGE3Q14657 143 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 Q86TA4 180 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 BPESC1Q9GZL8 116 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 MRPS12O15235 138 aaKnown RBP6.58□□□□□ -1.36
LDB3-201ENST00000263066 MRPL20Q9BYC9 149 aaKnown RBP6.58□□□□□ -1.36
LDB3-201ENST00000263066 METRNQ9UJH8 293 aa6.58□□□□□ -1.36
LDB3-201ENST00000263066 IGKV3-7A0A075B6H7 116 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 PSPNO60542 156 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 IGLV2-14P01704 120 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
LDB3-201ENST00000263066 ZNF672Q499Z4 452 aaPredicted RBP6.57□□□□□ -1.36
LDB3-201ENST00000263066 Q6Q795 121 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 IGFL2Q6UWQ7 119 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 TNFRSF13BO14836 293 aaPredicted RBP6.57□□□□□ -1.36
LDB3-201ENST00000263066 IGHV1-46P01743 117 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 CFC1BP0CG36 223 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 CFC1P0CG37 223 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 SYNJ2BPP57105 145 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 NSUN5P1Q3KNT7 163 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 BRD3OSQ6XYD6 125 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 IGLV3-1P01715 115 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 KMT2EQ8IZD2 1858 aa6.57□□□□□ -1.36
LDB3-201ENST00000263066 IGHV3-35A0A0C4DH35 117 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 NDUFA11Q86Y39 141 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 Q8N7P7 452 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 EEF1AKMT3Q96AZ1 226 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 FAM236DA0A1B0GTK5 79 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 F5H697 171 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 FAM236CP0DP71 79 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
LDB3-201ENST00000263066 CIRBPQ14011 172 aaKnown RBP6.56□□□□□ -1.36
LDB3-201ENST00000263066 SPRNQ5BIV9 151 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 S100A7L2Q5SY68 101 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 ZNRD1Q9P1U0 126 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 CGB1A6NKQ9 187 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 F8VRH5 84 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 DLX6P56179 175 aa6.56□□□□□ -1.36
LDB3-201ENST00000263066 ITLN2Q8WWU7 325 aaPredicted RBP6.56□□□□□ -1.36
LDB3-201ENST00000263066 RPL11P62913 178 aaKnown RBP6.55□□□□□ -1.36
LDB3-201ENST00000263066 RNF125Q96EQ8 232 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 LINC01587Q99440 93 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 JPT2Q9H910 190 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 LYPD2Q6UXB3 125 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 FOXL2NBQ6ZUU3 175 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 FXYD5Q96DB9 178 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 FLNAP21333 2647 aaKnown RBP6.55□□□□□ -1.36
LDB3-201ENST00000263066 IGKV1OR2-108A0A075B7D4 117 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 ERCC8Q13216 396 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
LDB3-201ENST00000263066 RPUSD1Q9UJJ7 312 aaKnown RBP6.55□□□□□ -1.36
LDB3-201ENST00000263066 TRBV6-6A0A0A6YYG2 114 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 LRBAP50851 2863 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 MDFICQ9P1T7 246 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 DNAL4O96015 105 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 PFN2P35080 140 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 C8orf31Q8N9H6 132 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 S4R3C0 116 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
LDB3-201ENST00000263066 SHISA9B4DS77 424 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms