RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 RNF223E7ERA6 249 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 SRD5A1P18405 259 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 C19orf54Q5BKX5 351 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 BAALCQ8WXS3 180 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 TRBV7-3A0A075B6L6 115 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 SOCS3O14543 225 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 TMEM238C9JI98 176 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 SPOCK3Q9BQ16 436 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 C20orf78Q9BR46 151 aa14.62□□□□□ -0.07
SCARB1-201ENST00000261693 OVOL1O14753 267 aa14.61□□□□□ -0.07
SCARB1-201ENST00000261693 WFDC12Q8WWY7 111 aa14.61□□□□□ -0.07
SCARB1-201ENST00000261693 CELSR2Q9HCU4 2923 aa14.61□□□□□ -0.07
SCARB1-201ENST00000261693 PRSS29PA6NIE9 313 aa14.61□□□□□ -0.07
SCARB1-201ENST00000261693 SH2D6Q7Z4S9 175 aa14.6□□□□□ -0.07
SCARB1-201ENST00000261693 NDUFA4O00483 81 aa14.6□□□□□ -0.07
SCARB1-201ENST00000261693 LGALS1P09382 135 aaKnown RBP14.6□□□□□ -0.07
SCARB1-201ENST00000261693 RNASE3P12724 160 aaKnown RBP14.6□□□□□ -0.07
SCARB1-201ENST00000261693 SCGB2A2Q13296 93 aa14.6□□□□□ -0.07
SCARB1-201ENST00000261693 PRADC1Q9BSG0 188 aa14.6□□□□□ -0.07
SCARB1-201ENST00000261693 EMP1P54849 157 aa14.59□□□□□ -0.07
SCARB1-201ENST00000261693 SLC25A16P16260 332 aa14.59□□□□□ -0.07
SCARB1-201ENST00000261693 RRN3P1Q2M238 152 aa14.58□□□□□ -0.08
SCARB1-201ENST00000261693 ETDBQ3ZM63 59 aa14.58□□□□□ -0.08
SCARB1-201ENST00000261693 JPT2Q9H910 190 aa14.58□□□□□ -0.08
SCARB1-201ENST00000261693 SPANXB1Q9NS25 103 aaPredicted RBP14.58□□□□□ -0.08
SCARB1-201ENST00000261693 F8W1H4 67 aa14.58□□□□□ -0.08
SCARB1-201ENST00000261693 DUSP14O95147 198 aaKnown RBP14.58□□□□□ -0.08
SCARB1-201ENST00000261693 PF4V1P10720 104 aa14.58□□□□□ -0.08
SCARB1-201ENST00000261693 CSPG4Q6UVK1 2322 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 IGHV1-69DA0A0B4J2H0 117 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 IGHV1-69P01742 117 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 EDN2P20800 178 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 ZNF815PA8K554 130 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 Q6ZS46 218 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 KLHL30-AS1Q8NEE0 82 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 PLEKHB2Q96CS7 222 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 ITPR1Q14643 2758 aa14.57□□□□□ -0.08
SCARB1-201ENST00000261693 C19orf84I3L1E1 186 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 LY6DQ14210 128 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 CD300EQ496F6 205 aaPredicted RBP14.56□□□□□ -0.08
SCARB1-201ENST00000261693 SCGB1D4Q6XE38 83 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 RHPN1-AS1Q9BWJ2 59 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 GTSF1LQ9H1H1 148 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 UCNP55089 124 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 SFTA2Q6UW10 78 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 FAM19A4Q96LR4 140 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 ATP6V0BQ99437 205 aa14.56□□□□□ -0.08
SCARB1-201ENST00000261693 SORL1Q92673 2214 aa14.55□□□□□ -0.08
SCARB1-201ENST00000261693 IGHV4-39P01824 125 aa14.55□□□□□ -0.08
SCARB1-201ENST00000261693 IGHV4-38-2P0DP08 117 aa14.55□□□□□ -0.08
SCARB1-201ENST00000261693 BLCAPP62952 87 aa14.55□□□□□ -0.08
SCARB1-201ENST00000261693 A0A087WWL8 130 aa14.54□□□□□ -0.08
SCARB1-201ENST00000261693 HOXA3O43365 443 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-201ENST00000261693 GAGE13Q4V321 117 aa14.54□□□□□ -0.08
SCARB1-201ENST00000261693 MORN3Q6PF18 240 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-201ENST00000261693 TSSC4Q9Y5U2 329 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-201ENST00000261693 H3BUX3 64 aa14.54□□□□□ -0.08
SCARB1-201ENST00000261693 CRYGDP07320 174 aa14.54□□□□□ -0.08
SCARB1-201ENST00000261693 CRIP2P52943 208 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-201ENST00000261693 PGPEP1Q9NXJ5 209 aa14.54□□□□□ -0.08
SCARB1-201ENST00000261693 TP53TG1Q9Y2A0 90 aa14.53□□□□□ -0.08
SCARB1-201ENST00000261693 A0A1B0GWB2 263 aa14.53□□□□□ -0.08
SCARB1-201ENST00000261693 TSHBP01222 138 aa14.53□□□□□ -0.08
SCARB1-201ENST00000261693 RPL39P62891 51 aaKnown RBP14.53□□□□□ -0.08
SCARB1-201ENST00000261693 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
SCARB1-201ENST00000261693 MRPL16Q9NX20 251 aaKnown RBP14.52□□□□□ -0.08
SCARB1-201ENST00000261693 C11orf86A6NJI1 115 aa14.52□□□□□ -0.09
SCARB1-201ENST00000261693 F5H697 171 aa14.52□□□□□ -0.09
SCARB1-201ENST00000261693 AZU1P20160 251 aa14.52□□□□□ -0.09
SCARB1-201ENST00000261693 LINC00315P59091 139 aa14.52□□□□□ -0.09
SCARB1-201ENST00000261693 SAMD13Q5VXD3 122 aa14.52□□□□□ -0.09
SCARB1-201ENST00000261693 IGHV4-61A0A0C4DH41 118 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 LINC01619G3V211 115 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 MED14OSP0DP75 135 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 INSL3P51460 131 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 SPAG8Q99932 426 aaPredicted RBP14.51□□□□□ -0.09
SCARB1-201ENST00000261693 KIF25-AS1Q9Y6Z4 181 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 SMAGPQ0VAQ4 97 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 USMG5Q96IX5 58 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 PRO0461Q9UI25 63 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 DOPEY2Q9Y3R5 2298 aa14.51□□□□□ -0.09
SCARB1-201ENST00000261693 COX6B1P14854 86 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 SUMO4Q6EEV6 95 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 FAM159AQ6UWV7 190 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 IGLV4-69A0A075B6H9 119 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 TRAV12-3A0A0B4J271 114 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 LINC01549A6NIU2 74 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 IGHG2P01859 326 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 APRG1Q8IVJ8 170 aa14.5□□□□□ -0.09
SCARB1-201ENST00000261693 GAGE12HA6NDE8 117 aa14.49□□□□□ -0.09
SCARB1-201ENST00000261693 PPP1R17O96001 155 aa14.49□□□□□ -0.09
SCARB1-201ENST00000261693 CD7P09564 240 aa14.49□□□□□ -0.09
SCARB1-201ENST00000261693 ZFP2Q6ZN57 461 aa14.49□□□□□ -0.09
SCARB1-201ENST00000261693 FAM74A4Q5TZK3 123 aa14.49□□□□□ -0.09
SCARB1-201ENST00000261693 DAZ1Q9NQZ3 744 aaKnown RBP14.49□□□□□ -0.09
SCARB1-201ENST00000261693 SIGMAR1Q99720 223 aa14.48□□□□□ -0.09
SCARB1-201ENST00000261693 APOMO95445 188 aa14.48□□□□□ -0.09
SCARB1-201ENST00000261693 IGKV3-20P01619 116 aa14.48□□□□□ -0.09
SCARB1-201ENST00000261693 LOC107984156A0A0G2JMH3 177 aa14.47□□□□□ -0.09
SCARB1-201ENST00000261693 IGIPA6NJ69 53 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms