RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TNRC6AQ8NDV7 1962 aaKnown RBP11.53□□□□□ -0.56
UBE4B-201ENST00000253251 F8VRH5 84 aa11.53□□□□□ -0.56
UBE4B-201ENST00000253251 PRIMA1Q86XR5 153 aa11.53□□□□□ -0.56
UBE4B-201ENST00000253251 TRAV26-2A0A0B4J265 109 aa11.53□□□□□ -0.56
UBE4B-201ENST00000253251 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
UBE4B-201ENST00000253251 Q8N6K4 173 aa11.53□□□□□ -0.56
UBE4B-201ENST00000253251 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.56
UBE4B-201ENST00000253251 ODF3Q96PU9 254 aa11.52□□□□□ -0.56
UBE4B-201ENST00000253251 POLR3KQ9Y2Y1 108 aaPredicted RBP11.52□□□□□ -0.56
UBE4B-201ENST00000253251 CFHR3Q02985 330 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 SH2D6Q7Z4S9 175 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 ZMAT4Q9H898 229 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 NOTCH2Q04721 2471 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 ARFGEF3Q5TH69 2177 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 CTRLP40313 264 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
UBE4B-201ENST00000253251 PAX4O43316 350 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 RMI2Q96E14 147 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 Q6ZWC4 215 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 LEPROTO15243 131 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 SAMD5Q5TGI4 173 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 NDUFA11Q86Y39 141 aa11.51□□□□□ -0.57
UBE4B-201ENST00000253251 PRR14LQ5THK1 2151 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 ATRXP46100 2492 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 A0A0J9YX75 114 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 HERVK_113P63121 156 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 ZNF503Q96F45 646 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 APRG1Q8IVJ8 170 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 NOP10Q9NPE3 64 aaKnown RBP11.5□□□□□ -0.57
UBE4B-201ENST00000253251 PRAC2D3DTV9 90 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-201ENST00000253251 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
UBE4B-201ENST00000253251 BOD1L2Q8IYS8 172 aa11.49□□□□□ -0.57
UBE4B-201ENST00000253251 C19orf71A6NCJ1 209 aa11.49□□□□□ -0.57
UBE4B-201ENST00000253251 ATXN8Q156A1 80 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 JPT2Q9H910 190 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 A0A1B0GV72 72 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 PSCAO43653 123 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 STPG4Q8N801 248 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 ZNF747Q9BV97 191 aa11.48□□□□□ -0.57
UBE4B-201ENST00000253251 A0A0U1RRA0 63 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 MPV17L2Q567V2 206 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 SPART-AS1P0CW21 52 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 TRBV12-3P01733 135 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 TLN1Q9Y490 2541 aaKnown RBP11.47□□□□□ -0.57
UBE4B-201ENST00000253251 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 MBD6Q96DN6 1003 aa11.47□□□□□ -0.57
UBE4B-201ENST00000253251 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.57
UBE4B-201ENST00000253251 COX8AP10176 69 aa11.46□□□□□ -0.57
UBE4B-201ENST00000253251 TAL2Q16559 108 aa11.46□□□□□ -0.57
UBE4B-201ENST00000253251 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.57
UBE4B-201ENST00000253251 IGLC3P0DOY3 106 aa11.46□□□□□ -0.58
UBE4B-201ENST00000253251 GAGE6Q13070 117 aa11.46□□□□□ -0.58
UBE4B-201ENST00000253251 DAZ2Q13117 558 aaKnown RBP11.46□□□□□ -0.58
UBE4B-201ENST00000253251 DAZ4Q86SG3 579 aaKnown RBP11.46□□□□□ -0.58
UBE4B-201ENST00000253251 DAZ3Q9NR90 486 aaKnown RBP11.46□□□□□ -0.58
UBE4B-201ENST00000253251 NAV2Q8IVL1 2488 aa11.46□□□□□ -0.58
UBE4B-201ENST00000253251 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 ATP5G1P05496 136 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 SUMO4Q6EEV6 95 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-201ENST00000253251 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 SIVA1O15304 175 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 CDSNQ15517 529 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 SFTA2Q6UW10 78 aa11.45□□□□□ -0.58
UBE4B-201ENST00000253251 CSPG4Q6UVK1 2322 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 ZNF561-AS1K7EIQ3 104 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 Q8N1Y9 231 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 SCGB1A1P11684 91 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 ADAMTSL5Q6ZMM2 481 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 ZFAND3Q9H8U3 227 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 K7EQD1 137 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 K7EQG2 157 aa11.44□□□□□ -0.58
UBE4B-201ENST00000253251 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
UBE4B-201ENST00000253251 ASPHD1Q5U4P2 390 aa11.43□□□□□ -0.58
UBE4B-201ENST00000253251 PLA2G2AP14555 144 aa11.43□□□□□ -0.58
UBE4B-201ENST00000253251 KIR3DS1Q14943 382 aa11.43□□□□□ -0.58
UBE4B-201ENST00000253251 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
UBE4B-201ENST00000253251 CST9LQ9H4G1 147 aa11.42□□□□□ -0.58
UBE4B-201ENST00000253251 NDUFA12Q9UI09 145 aa11.42□□□□□ -0.58
UBE4B-201ENST00000253251 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
UBE4B-201ENST00000253251 EML5Q05BV3 1969 aa11.42□□□□□ -0.58
UBE4B-201ENST00000253251 Q6ZSV7 163 aa11.42□□□□□ -0.58
UBE4B-201ENST00000253251 MLST8Q9BVC4 326 aa11.42□□□□□ -0.58
UBE4B-201ENST00000253251 IGLL1P15814 213 aa11.41□□□□□ -0.58
UBE4B-201ENST00000253251 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
UBE4B-201ENST00000253251 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
UBE4B-201ENST00000253251 EXPH5Q8NEV8 1989 aa11.4□□□□□ -0.58
UBE4B-201ENST00000253251 MSRB1Q9NZV6 116 aa11.4□□□□□ -0.58
UBE4B-201ENST00000253251 ICOSQ9Y6W8 199 aa11.4□□□□□ -0.58
UBE4B-201ENST00000253251 J3QQQ9 107 aa11.4□□□□□ -0.58
UBE4B-201ENST00000253251 PSMB8P28062 276 aa11.4□□□□□ -0.58
UBE4B-201ENST00000253251 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms