RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PTH2Q96A98 100 aa15.75■□□□□ 0.11
LSM4-201ENST00000252816 hCG_2014768A0A024R1R8 64 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 LOC100131303A0A0U1RQF7 123 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 B4DEV8 164 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 KRBOX1C9JBD0 128 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 NXPH4O95158 308 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 SRIP30626 198 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 FAM162BQ5T6X4 162 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 ZNF575Q86XF7 245 aa15.74■□□□□ 0.11
LSM4-201ENST00000252816 PCNPQ8WW12 178 aaKnown RBP15.74■□□□□ 0.11
LSM4-201ENST00000252816 M0R036 132 aa15.73■□□□□ 0.11
LSM4-201ENST00000252816 S100A4P26447 101 aaKnown RBP15.73■□□□□ 0.11
LSM4-201ENST00000252816 ASIPP42127 132 aa15.73■□□□□ 0.11
LSM4-201ENST00000252816 ZNF674Q2M3X9 581 aa15.73■□□□□ 0.11
LSM4-201ENST00000252816 TTC32Q5I0X7 151 aa15.73■□□□□ 0.11
LSM4-201ENST00000252816 IGHV3-73A0A0B4J1V6 119 aa15.72■□□□□ 0.11
LSM4-201ENST00000252816 TRAV1-1A0A0B4J248 108 aa15.72■□□□□ 0.11
LSM4-201ENST00000252816 RAB5CP51148 216 aa15.72■□□□□ 0.11
LSM4-201ENST00000252816 EIF5AL1Q6IS14 154 aaKnown RBP15.72■□□□□ 0.11
LSM4-201ENST00000252816 NHLRC2Q8NBF2 726 aa15.72■□□□□ 0.11
LSM4-201ENST00000252816 A0A1W2PPQ1 181 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 H3BVH4 76 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 SIVA1O15304 175 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 SULT1A2P50226 295 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 TNP2Q05952 138 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 AKAP14Q86UN6 197 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 SLC25A29Q8N8R3 303 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 IL36BQ9NZH7 164 aa15.71■□□□□ 0.11
LSM4-201ENST00000252816 DNAH11Q96DT5 4516 aa15.7■□□□□ 0.1
LSM4-201ENST00000252816 GRIFINA4D1Z8 144 aa15.7■□□□□ 0.1
LSM4-201ENST00000252816 DNLZQ5SXM8 178 aa15.7■□□□□ 0.1
LSM4-201ENST00000252816 SLC51BQ86UW2 128 aa15.7■□□□□ 0.1
LSM4-201ENST00000252816 GNG13Q9P2W3 67 aa15.7■□□□□ 0.1
LSM4-201ENST00000252816 DYNC1H1Q14204 4646 aaKnown RBP15.7■□□□□ 0.1
LSM4-201ENST00000252816 S100A9P06702 114 aaKnown RBP15.69■□□□□ 0.1
LSM4-201ENST00000252816 LINC01559Q495D7 138 aa15.69■□□□□ 0.1
LSM4-201ENST00000252816 TXNDC17Q9BRA2 123 aa15.69■□□□□ 0.1
LSM4-201ENST00000252816 MANBALQ9NQG1 85 aa15.69■□□□□ 0.1
LSM4-201ENST00000252816 TMSB15BA0A087X1C1 80 aa15.68■□□□□ 0.1
LSM4-201ENST00000252816 CIDEAO60543 219 aa15.68■□□□□ 0.1
LSM4-201ENST00000252816 ARMS2P0C7Q2 107 aa15.68■□□□□ 0.1
LSM4-201ENST00000252816 PIK3CD-AS1Q5SR53 167 aa15.68■□□□□ 0.1
LSM4-201ENST00000252816 MLST8Q9BVC4 326 aa15.68■□□□□ 0.1
LSM4-201ENST00000252816 DMRTA1Q5VZB9 504 aa15.67■□□□□ 0.1
LSM4-201ENST00000252816 BAGE2Q86Y30 109 aa15.67■□□□□ 0.1
LSM4-201ENST00000252816 C9orf62Q8N4C0 152 aa15.67■□□□□ 0.1
LSM4-201ENST00000252816 PARLQ9H300 379 aa15.67■□□□□ 0.1
LSM4-201ENST00000252816 JPT2Q9H910 190 aa15.67■□□□□ 0.1
LSM4-201ENST00000252816 TRBV6-4A0A1B0GX49 114 aa15.66■□□□□ 0.1
LSM4-201ENST00000252816 Q6ZSN1 163 aa15.66■□□□□ 0.1
LSM4-201ENST00000252816 A8MWV9 139 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 RHOHQ15669 191 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 WFDC10BQ8IUB3 73 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 C11orf52Q96A22 123 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 PRADC1Q9BSG0 188 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 DERL1Q9BUN8 251 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 SAMD10Q9BYL1 202 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 SCRT2Q9NQ03 307 aa15.65■□□□□ 0.1
LSM4-201ENST00000252816 MGST1P10620 155 aaKnown RBP15.64■□□□□ 0.09
LSM4-201ENST00000252816 RPL35P42766 123 aaKnown RBP15.64■□□□□ 0.09
LSM4-201ENST00000252816 LINC00315P59091 139 aa15.64■□□□□ 0.09
LSM4-201ENST00000252816 UFSP1Q6NVU6 142 aa15.64■□□□□ 0.09
LSM4-201ENST00000252816 ZFP2Q6ZN57 461 aa15.64■□□□□ 0.09
LSM4-201ENST00000252816 SH2D6Q7Z4S9 175 aa15.64■□□□□ 0.09
LSM4-201ENST00000252816 TEX46H3BTG2 121 aa15.63■□□□□ 0.09
LSM4-201ENST00000252816 RPL19P84098 196 aaKnown RBP15.63■□□□□ 0.09
LSM4-201ENST00000252816 BTF3P20290 206 aaKnown RBP15.62■□□□□ 0.09
LSM4-201ENST00000252816 TIRAPP58753 221 aa15.62■□□□□ 0.09
LSM4-201ENST00000252816 SYT8Q8NBV8 401 aa15.62■□□□□ 0.09
LSM4-201ENST00000252816 PHLDA3Q9Y5J5 127 aa15.62■□□□□ 0.09
LSM4-201ENST00000252816 A0A1B0GVG6 124 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 PRR27Q6MZM9 219 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 Q6ZRN7 208 aaPredicted RBP15.6■□□□□ 0.09
LSM4-201ENST00000252816 Q9UF83 564 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 TNFRSF18Q9Y5U5 241 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 LY96Q9Y6Y9 160 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 KIAA1109Q2LD37 5005 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 HERC2O95714 4834 aa15.6■□□□□ 0.09
LSM4-201ENST00000252816 M0R381 172 aa15.59■□□□□ 0.09
LSM4-201ENST00000252816 MEF2BQ02080 365 aaPredicted RBP15.59■□□□□ 0.09
LSM4-201ENST00000252816 DNAH10OSP0CZ25 163 aa15.58■□□□□ 0.08
LSM4-201ENST00000252816 BCL2P10415 239 aa15.58■□□□□ 0.08
LSM4-201ENST00000252816 CENPWQ5EE01 88 aa15.58■□□□□ 0.08
LSM4-201ENST00000252816 C14orf178Q8N769 122 aaPredicted RBP15.58■□□□□ 0.08
LSM4-201ENST00000252816 SFRP2Q96HF1 295 aa15.58■□□□□ 0.08
LSM4-201ENST00000252816 A0A087WWL8 130 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 RAB19A4D1S5 217 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 IGLV2-8P01709 118 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 CXCL1P09341 107 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 MED14OSP0DP75 135 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 FAM74A4Q5TZK3 123 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 ZFP82Q8N141 532 aa15.57■□□□□ 0.08
LSM4-201ENST00000252816 RHODO00212 210 aa15.56■□□□□ 0.08
LSM4-201ENST00000252816 IFNA1P01562 189 aa15.56■□□□□ 0.08
LSM4-201ENST00000252816 CRYGDP07320 174 aa15.56■□□□□ 0.08
LSM4-201ENST00000252816 LINC00694P0DN24 101 aa15.56■□□□□ 0.08
LSM4-201ENST00000252816 ATP6V0E2Q8NHE4 81 aa15.56■□□□□ 0.08
LSM4-201ENST00000252816 TRAV9-2A0A087WT02 112 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 GAGE12JA6NER3 117 aa15.55■□□□□ 0.08
LSM4-201ENST00000252816 PDE6DO43924 150 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms