RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 UBE2E1P51965 193 aa11.74□□□□□ -0.53
DDX55-201ENST00000238146 SFTA2Q6UW10 78 aa11.74□□□□□ -0.53
DDX55-201ENST00000238146 GPHB5Q86YW7 130 aa11.74□□□□□ -0.53
DDX55-201ENST00000238146 ZFP2Q6ZN57 461 aa11.73□□□□□ -0.53
DDX55-201ENST00000238146 NFE4Q86UQ8 179 aa11.73□□□□□ -0.53
DDX55-201ENST00000238146 DUSP14O95147 198 aaKnown RBP11.73□□□□□ -0.53
DDX55-201ENST00000238146 CD7P09564 240 aa11.73□□□□□ -0.53
DDX55-201ENST00000238146 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
DDX55-201ENST00000238146 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
DDX55-201ENST00000238146 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
DDX55-201ENST00000238146 PSMB2P49721 201 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 NBASA2RRP1 2371 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 CCL21O00585 134 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 GNRH2O43555 120 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 TSHBP01222 138 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 UBE2D3P61077 147 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 UBE2D2P62837 147 aa11.72□□□□□ -0.53
DDX55-201ENST00000238146 IGLV4-69A0A075B6H9 119 aa11.71□□□□□ -0.53
DDX55-201ENST00000238146 CKS1BP61024 79 aa11.71□□□□□ -0.53
DDX55-201ENST00000238146 TCTEX1D4Q5JR98 221 aa11.71□□□□□ -0.53
DDX55-201ENST00000238146 RNASE3P12724 160 aaKnown RBP11.71□□□□□ -0.54
DDX55-201ENST00000238146 UNQ9165/PRO28630Q6UXU0 137 aa11.71□□□□□ -0.54
DDX55-201ENST00000238146 C5orf56Q8N8D9 126 aa11.71□□□□□ -0.54
DDX55-201ENST00000238146 LINC00527Q9UJ94 153 aa11.71□□□□□ -0.54
DDX55-201ENST00000238146 SPTBN1Q01082 2364 aaKnown RBP11.7□□□□□ -0.54
DDX55-201ENST00000238146 SOCS3O14543 225 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 OVOL1O14753 267 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 MED14OSP0DP75 135 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
DDX55-201ENST00000238146 EMP1P54849 157 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 A0A0J9YY99 117 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 PPP1R17O96001 155 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 PTH2Q96A98 100 aa11.7□□□□□ -0.54
DDX55-201ENST00000238146 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 ZNF418Q8TF45 676 aaPredicted RBP11.69□□□□□ -0.54
DDX55-201ENST00000238146 FAM19A4Q96LR4 140 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 IGIPA6NJ69 53 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 F6UB75 175 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 ARL3P36405 182 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 LINC00315P59091 139 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 FHL3Q13643 280 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 POM121L12Q8N7R1 296 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
DDX55-201ENST00000238146 TRBV12-3P01733 135 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 TMEM219Q86XT9 240 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 KIF25-AS1Q9Y6Z4 181 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 PTPRQQ9UMZ3 2332 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 CEP295Q9C0D2 2601 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 TRAV41A0A0B4J266 112 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
DDX55-201ENST00000238146 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 Q6ZS46 218 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 MUC4Q99102 2169 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 IGHV4OR15-8A0A075B7B6 117 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 A0A087WW49 117 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 K7ENP7 123 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 PAPPA-AS1Q5QFB9 102 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
DDX55-201ENST00000238146 TCL1BO95988 128 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 HERVK_113P61574 105 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 RPL39P62891 51 aaKnown RBP11.66□□□□□ -0.54
DDX55-201ENST00000238146 PMVKQ15126 192 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 NPFFO15130 113 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 NXPH4O95158 308 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 CFC1BP0CG36 223 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 CFC1P0CG37 223 aa11.66□□□□□ -0.54
DDX55-201ENST00000238146 POLR2KP53803 58 aaKnown RBP11.66□□□□□ -0.54
DDX55-201ENST00000238146 A0A1W2PPR1 153 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 IGHV3-30P01768 117 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 MT-ATP8P03928 68 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 SPINK8P0C7L1 97 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 IGHV3-30-5P0DP03 117 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
DDX55-201ENST00000238146 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 TEN1Q86WV5 123 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 JPT2Q9H910 190 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 CRYBA4P53673 196 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 TCF15Q12870 199 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 ZFHX3Q15911 3703 aa11.65□□□□□ -0.54
DDX55-201ENST00000238146 NDUFA4O00483 81 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
DDX55-201ENST00000238146 SLC25A29Q8N8R3 303 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 WFDC12Q8WWY7 111 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 CLUHP3Q96NS8 147 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 IGKV3-7A0A075B6H7 116 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 XGP55808 180 aa11.64□□□□□ -0.55
DDX55-201ENST00000238146 PTPRZ1P23471 2315 aaPredicted RBP11.64□□□□□ -0.55
DDX55-201ENST00000238146 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
DDX55-201ENST00000238146 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms