RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 LY96Q9Y6Y9 160 aa13.52□□□□□ -0.25
CENPA-201ENST00000233505 VPS13DQ5THJ4 4388 aa13.51□□□□□ -0.25
CENPA-201ENST00000233505 H3BNG1 76 aa13.51□□□□□ -0.25
CENPA-201ENST00000233505 TMSB15BA0A087X1C1 80 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 GRIFINA4D1Z8 144 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 PGPEP1LA6NFU8 196 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 H3BVH4 76 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 CIDEAO60543 219 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 ARMS2P0C7Q2 107 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 SLAQ13239 276 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 PEA15Q15121 130 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 CLLU1Q5K131 121 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 LGALS9CQ6DKI2 356 aa13.5□□□□□ -0.25
CENPA-201ENST00000233505 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
CENPA-201ENST00000233505 RPS20P60866 119 aaKnown RBP13.49□□□□□ -0.25
CENPA-201ENST00000233505 RPL19P84098 196 aaKnown RBP13.49□□□□□ -0.25
CENPA-201ENST00000233505 IFITM2Q01629 132 aa13.49□□□□□ -0.25
CENPA-201ENST00000233505 POM121L12Q8N7R1 296 aa13.49□□□□□ -0.25
CENPA-201ENST00000233505 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
CENPA-201ENST00000233505 SMIM7Q9BQ49 75 aa13.49□□□□□ -0.25
CENPA-201ENST00000233505 EPPK1P58107 5090 aaKnown RBP13.49□□□□□ -0.25
CENPA-201ENST00000233505 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 K7EN84 100 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 RS1O15537 224 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 P01737 135 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 CEBPGP53567 150 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 FAM74A3Q4VXF1 159 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 SYT8Q8NBV8 401 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 OR4C5Q8NGB2 326 aa13.48□□□□□ -0.25
CENPA-201ENST00000233505 SNAI2O43623 268 aa13.47□□□□□ -0.25
CENPA-201ENST00000233505 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
CENPA-201ENST00000233505 FHL2Q14192 279 aa13.47□□□□□ -0.25
CENPA-201ENST00000233505 ZNF479Q96JC4 524 aa13.47□□□□□ -0.25
CENPA-201ENST00000233505 SSBP4Q9BWG4 385 aaPredicted RBP13.47□□□□□ -0.25
CENPA-201ENST00000233505 PRO0255Q9UI72 69 aa13.47□□□□□ -0.25
CENPA-201ENST00000233505 PHLDA3Q9Y5J5 127 aa13.47□□□□□ -0.25
CENPA-201ENST00000233505 XKRY2A2RUG3 117 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 ZNF727A8MUV8 499 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 A8MWV9 139 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 NXPH4O95158 308 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 OR5AL1P0C617 328 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 CFAP126Q5VTH2 177 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 ZFP82Q8N141 532 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 OR2D3Q8NGH3 330 aa13.46□□□□□ -0.25
CENPA-201ENST00000233505 C9JQL5 133 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 SFTA3P0C7M3 94 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 P0DMU3 169 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 FAM231CP0DMU5 169 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 SRSF3P84103 164 aaKnown RBP13.45□□□□□ -0.26
CENPA-201ENST00000233505 FAM231DQ6ZW35 169 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 VSIG2Q96IQ7 327 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 MUC4Q99102 2169 aa13.45□□□□□ -0.26
CENPA-201ENST00000233505 TRGV4A0A0C4DH28 118 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 CRYBA4P53673 196 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 LINC01551Q86U37 167 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 NUDT10Q8NFP7 164 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 NUDT11Q96G61 164 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 HHLA3Q9XRX5 114 aa13.44□□□□□ -0.26
CENPA-201ENST00000233505 IGLC6P0CF74 106 aa13.43□□□□□ -0.26
CENPA-201ENST00000233505 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
CENPA-201ENST00000233505 RPP21Q9H633 154 aaKnown RBP13.43□□□□□ -0.26
CENPA-201ENST00000233505 DNAH6Q9C0G6 4158 aa13.42□□□□□ -0.26
CENPA-201ENST00000233505 A0A0J9YY99 117 aa13.42□□□□□ -0.26
CENPA-201ENST00000233505 PAX4O43316 350 aa13.42□□□□□ -0.26
CENPA-201ENST00000233505 LY6G6CO95867 125 aa13.42□□□□□ -0.26
CENPA-201ENST00000233505 GATA1P15976 413 aaPredicted RBP13.42□□□□□ -0.26
CENPA-201ENST00000233505 A0A1W2PPQ1 181 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 RHODO00212 210 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 NUDT3O95989 172 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 TMEM241Q24JQ0 296 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 RNF212Q495C1 297 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 CT83Q5H943 113 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 FER1L6-AS1Q8NA97 138 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 OR10AG1Q8NH19 301 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 SFRP2Q96HF1 295 aa13.41□□□□□ -0.26
CENPA-201ENST00000233505 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
CENPA-201ENST00000233505 M0R381 172 aa13.4□□□□□ -0.26
CENPA-201ENST00000233505 FAM3BP58499 235 aaPredicted RBP13.4□□□□□ -0.26
CENPA-201ENST00000233505 SOHLH1Q5JUK2 328 aa13.4□□□□□ -0.26
CENPA-201ENST00000233505 UFSP1Q6NVU6 142 aa13.4□□□□□ -0.26
CENPA-201ENST00000233505 NAT8Q9UHE5 227 aa13.4□□□□□ -0.26
CENPA-201ENST00000233505 TRBV6-4A0A1B0GX49 114 aa13.39□□□□□ -0.27
CENPA-201ENST00000233505 F2Z2F3 143 aa13.39□□□□□ -0.27
CENPA-201ENST00000233505 GZMBP10144 247 aa13.39□□□□□ -0.27
CENPA-201ENST00000233505 ICOSQ9Y6W8 199 aa13.39□□□□□ -0.27
CENPA-201ENST00000233505 A0A096LPF7 62 aa13.38□□□□□ -0.27
CENPA-201ENST00000233505 GATCO43716 136 aaKnown RBP13.38□□□□□ -0.27
CENPA-201ENST00000233505 CTRLP40313 264 aa13.38□□□□□ -0.27
CENPA-201ENST00000233505 ERVFC1-1P60608 527 aa13.38□□□□□ -0.27
CENPA-201ENST00000233505 SPANXN1Q5VSR9 72 aa13.38□□□□□ -0.27
CENPA-201ENST00000233505 OSTCQ9NRP0 149 aa13.38□□□□□ -0.27
CENPA-201ENST00000233505 KMT2AQ03164 3969 aa13.38□□□□□ -0.27
CENPA-201ENST00000233505 BIRC6Q9NR09 4857 aa13.37□□□□□ -0.27
CENPA-201ENST00000233505 RPL23P62829 140 aaKnown RBP13.37□□□□□ -0.27
CENPA-201ENST00000233505 CACNG7P62955 275 aa13.37□□□□□ -0.27
CENPA-201ENST00000233505 RHOHQ15669 191 aa13.37□□□□□ -0.27
CENPA-201ENST00000233505 MRPL23Q16540 153 aaKnown RBP13.37□□□□□ -0.27
CENPA-201ENST00000233505 WDR73Q6P4I2 378 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms