RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FAM57AQ8TBR7 257 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 UBTD1Q9HAC8 227 aa10.91□□□□□ -0.66
PCDHB3-201ENST00000231130 SPG11Q96JI7 2443 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 TRBV6-1A0A0K0K1D8 114 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 CEACAM4O75871 244 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 SRD5A1P18405 259 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 Q8N8P6 123 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 TRAV2A0A0B4J234 112 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 ZNF56Q15929 161 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 RAB1BQ9H0U4 201 aa10.9□□□□□ -0.66
PCDHB3-201ENST00000231130 PDE6HQ13956 83 aa10.9□□□□□ -0.67
PCDHB3-201ENST00000231130 C8orf31Q8N9H6 132 aa10.9□□□□□ -0.67
PCDHB3-201ENST00000231130 C11orf21Q9P2W6 132 aa10.9□□□□□ -0.67
PCDHB3-201ENST00000231130 DPM3Q9P2X0 92 aa10.9□□□□□ -0.67
PCDHB3-201ENST00000231130 TEX49A0A1B0GTD5 131 aa10.89□□□□□ -0.67
PCDHB3-201ENST00000231130 DEFB1P60022 68 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 Q8N1Y9 231 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 IGHG4P01861 327 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 KAAG1Q9UBP8 84 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 CTSGP08311 255 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 MGPP08493 103 aa10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 PRR30Q53SZ7 412 aaPredicted RBP10.88□□□□□ -0.67
PCDHB3-201ENST00000231130 FOXC1Q12948 553 aa10.87□□□□□ -0.67
PCDHB3-201ENST00000231130 Q6ZS92 163 aa10.87□□□□□ -0.67
PCDHB3-201ENST00000231130 CELSR1Q9NYQ6 3014 aa10.87□□□□□ -0.67
PCDHB3-201ENST00000231130 NOTCH3Q9UM47 2321 aa10.87□□□□□ -0.67
PCDHB3-201ENST00000231130 F8W735 103 aaPredicted RBP10.87□□□□□ -0.67
PCDHB3-201ENST00000231130 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
PCDHB3-201ENST00000231130 HERVK_113P61574 105 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 OR10J6PQ8NGY7 276 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 AGPAT4-IT1Q9H0P7 198 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 LOC107984640A0A0U1RRK4 108 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 ASIPP42127 132 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 TCF15Q12870 199 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 CLEC19AQ6UXS0 136 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 LINC00527Q9UJ94 153 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 IGLV11-55A0A075B6I3 123 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 S100A4P26447 101 aaKnown RBP10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 C10orf126Q8N4M7 172 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 PRO1854Q9UHT4 67 aa10.86□□□□□ -0.67
PCDHB3-201ENST00000231130 UBE2D3P61077 147 aa10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 UBE2D2P62837 147 aa10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 CENPVL3A0A0U1RRI6 287 aa10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 IGF1P05019 195 aa10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 CD3EP07766 207 aa10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 RPL11P62913 178 aaKnown RBP10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
PCDHB3-201ENST00000231130 GRNP28799 593 aaKnown RBP10.84□□□□□ -0.67
PCDHB3-201ENST00000231130 C14orf178Q8N769 122 aaPredicted RBP10.84□□□□□ -0.67
PCDHB3-201ENST00000231130 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
PCDHB3-201ENST00000231130 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
PCDHB3-201ENST00000231130 UBE2D1P51668 147 aa10.84□□□□□ -0.67
PCDHB3-201ENST00000231130 ZNF672Q499Z4 452 aaPredicted RBP10.84□□□□□ -0.67
PCDHB3-201ENST00000231130 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.67
PCDHB3-201ENST00000231130 CFC1BP0CG36 223 aa10.83□□□□□ -0.67
PCDHB3-201ENST00000231130 CFC1P0CG37 223 aa10.83□□□□□ -0.67
PCDHB3-201ENST00000231130 LINC00694P0DN24 101 aa10.83□□□□□ -0.67
PCDHB3-201ENST00000231130 LINC01559Q495D7 138 aa10.83□□□□□ -0.67
PCDHB3-201ENST00000231130 IGF2RP11717 2491 aa10.83□□□□□ -0.68
PCDHB3-201ENST00000231130 C9orf153Q5TBE3 101 aa10.83□□□□□ -0.68
PCDHB3-201ENST00000231130 G3V318 75 aa10.83□□□□□ -0.68
PCDHB3-201ENST00000231130 BSNQ9UPA5 3926 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 Q6ZS46 218 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 PRSS2P07478 247 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 PTPRQQ9UMZ3 2332 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 ZNF292O60281 2723 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 C2orf82Q6UX34 121 aa10.82□□□□□ -0.68
PCDHB3-201ENST00000231130 CD7P09564 240 aa10.81□□□□□ -0.68
PCDHB3-201ENST00000231130 PF4V1P10720 104 aa10.81□□□□□ -0.68
PCDHB3-201ENST00000231130 LY6LH3BQJ8 138 aa10.81□□□□□ -0.68
PCDHB3-201ENST00000231130 ZFHX3Q15911 3703 aa10.81□□□□□ -0.68
PCDHB3-201ENST00000231130 IGLV2-18A0A075B6J9 118 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 A4D1N5 150 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 B9A039 149 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 NRACQ8N912 160 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 C16orf92Q96LL3 132 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 H3BMM0 161 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 C2orf66Q6UXQ4 117 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 CSPG4Q6UVK1 2322 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 FAM236AA0A1B0GUQ0 79 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 FAM236BA0A1B0GV22 79 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 OOSP1A8MZH6 123 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 KLK5Q9Y337 293 aaPredicted RBP10.8□□□□□ -0.68
PCDHB3-201ENST00000231130 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 CUBNO60494 3623 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 BUB3O43684 328 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 PMVKQ15126 192 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 RASL10AQ92737 203 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 ODF3Q96PU9 254 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 RNF5Q99942 180 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
PCDHB3-201ENST00000231130 CSDC2Q9Y534 153 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms