RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 GNRH2O43555 120 aa9□□□□□ -0.97
NOD1-201ENST00000222823 NPBQ8NG41 125 aa9□□□□□ -0.97
NOD1-201ENST00000222823 RITA1Q96K30 269 aa9□□□□□ -0.97
NOD1-201ENST00000222823 CTSGP08311 255 aa9□□□□□ -0.97
NOD1-201ENST00000222823 PFN2P35080 140 aa9□□□□□ -0.97
NOD1-201ENST00000222823 MRPL53Q96EL3 112 aaKnown RBP9□□□□□ -0.97
NOD1-201ENST00000222823 NDUFA12Q9UI09 145 aa9□□□□□ -0.97
NOD1-201ENST00000222823 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 IGHV4-38-2P0DP08 117 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 EIF4EBP1Q13541 118 aaPredicted RBP8.99□□□□□ -0.97
NOD1-201ENST00000222823 MORN5Q5VZ52 161 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 ADORA2A-AS1P86434 159 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 SRSF2Q01130 221 aaKnown RBP8.99□□□□□ -0.97
NOD1-201ENST00000222823 GAGE6Q13070 117 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 MSMPQ1L6U9 139 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 FOXI2Q6ZQN5 318 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 GP9P14770 177 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 OVOL2Q9BRP0 275 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 JMJD1CQ15652 2540 aa8.99□□□□□ -0.97
NOD1-201ENST00000222823 TNRC6AQ8NDV7 1962 aaKnown RBP8.99□□□□□ -0.97
NOD1-201ENST00000222823 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 ADAMTSL5Q6ZMM2 481 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 Q8N9W7 124 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 RBAKDNA6NC62 111 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 DEFB136Q30KP8 78 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 WIPF2Q8TF74 440 aaPredicted RBP8.98□□□□□ -0.97
NOD1-201ENST00000222823 AJUBAQ96IF1 538 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 DNAJC30Q96LL9 226 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 PROP1O75360 226 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 CFHR4Q92496 578 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 ZNF747Q9BV97 191 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 ARHGAP21Q5T5U3 1957 aa8.98□□□□□ -0.97
NOD1-201ENST00000222823 APOC4P55056 127 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 ZNF493Q6ZR52 646 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 BUB3O43684 328 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 ZFAND6Q6FIF0 208 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 C10orf105Q8TEF2 133 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 DKK2Q9UBU2 259 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 A0A0C4DFX4 3053 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 TRBV20-1A0A075B6N2 111 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 CCL24O00175 119 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 SPRY2O43597 315 aa8.97□□□□□ -0.97
NOD1-201ENST00000222823 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
NOD1-201ENST00000222823 DEFB113Q30KQ7 82 aa8.96□□□□□ -0.97
NOD1-201ENST00000222823 IGKV1OR2-108A0A075B7D4 117 aa8.96□□□□□ -0.97
NOD1-201ENST00000222823 J3QQQ9 107 aa8.96□□□□□ -0.97
NOD1-201ENST00000222823 FAM167A-AS1Q96KT0 104 aa8.96□□□□□ -0.97
NOD1-201ENST00000222823 USP9XQ93008 2570 aaPredicted RBP8.96□□□□□ -0.98
NOD1-201ENST00000222823 CGB3P0DN86 165 aa8.96□□□□□ -0.98
NOD1-201ENST00000222823 CGB7P0DN87 165 aa8.96□□□□□ -0.98
NOD1-201ENST00000222823 CEP295Q9C0D2 2601 aa8.96□□□□□ -0.98
NOD1-201ENST00000222823 NXPH4O95158 308 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 PRB1P04280 392 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 C9orf118A6NHY6 69 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 PRSS29PA6NIE9 313 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
NOD1-201ENST00000222823 TSSC4Q9Y5U2 329 aaPredicted RBP8.95□□□□□ -0.98
NOD1-201ENST00000222823 SETD2Q9BYW2 2564 aaPredicted RBP8.95□□□□□ -0.98
NOD1-201ENST00000222823 KLF12Q9Y4X4 402 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 U3KQE9 123 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 KIAA1549Q9HCM3 1950 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 CHD9Q3L8U1 2897 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 NCKAP5O14513 1909 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 FBXL19-AS1Q494R0 122 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 BVES-AS1Q5T3Y7 98 aa8.95□□□□□ -0.98
NOD1-201ENST00000222823 E7EUB6 86 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 KLF5Q13887 457 aaPredicted RBP8.94□□□□□ -0.98
NOD1-201ENST00000222823 SPAG8Q99932 426 aaPredicted RBP8.94□□□□□ -0.98
NOD1-201ENST00000222823 RNASE13Q5GAN3 156 aaKnown RBP8.94□□□□□ -0.98
NOD1-201ENST00000222823 Q8N7P7 452 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 IGF2BP2-AS1Q96M15 143 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 MSRB1Q9NZV6 116 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 A0A096LPF7 62 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 F8WEM9 126 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 ZFP36P26651 326 aaKnown RBP8.94□□□□□ -0.98
NOD1-201ENST00000222823 Q8NA96 180 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 NRGNQ92686 78 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 NOP10Q9NPE3 64 aaKnown RBP8.94□□□□□ -0.98
NOD1-201ENST00000222823 PRO1854Q9UHT4 67 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 ADAMTS20P59510 1910 aa8.94□□□□□ -0.98
NOD1-201ENST00000222823 TEX22C9J3V5 150 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 K7EMI3 77 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 FGF6P10767 208 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
NOD1-201ENST00000222823 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
NOD1-201ENST00000222823 CRYGCP07315 174 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 SLURP1P55000 103 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 HERVK_113P63121 156 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 C5orf56Q8N8D9 126 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 IGLV2-23P01705 113 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 RHOHQ15669 191 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 MAJINQ3KP22 176 aa8.93□□□□□ -0.98
NOD1-201ENST00000222823 C16orf54Q6UWD8 224 aa8.92□□□□□ -0.98
NOD1-201ENST00000222823 LINC00574Q9H8X3 128 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms