RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 PGPEP1LA6NFU8 196 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 C9JQL5 133 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 FAM231DQ6ZW35 169 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 RASL10AQ92737 203 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
UPK1A-201ENST00000222275 KLK5Q9Y337 293 aaPredicted RBP9.68□□□□□ -0.86
UPK1A-201ENST00000222275 CIDEAO60543 219 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 ATP5G1P05496 136 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 SFTA3P0C7M3 94 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 Q6ZTC4 211 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 C15orf54Q8N8G6 183 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 OR2D3Q8NGH3 330 aa9.67□□□□□ -0.86
UPK1A-201ENST00000222275 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 DEFB131BA0A096LNP1 70 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 K7EN84 100 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 GAGE7O76087 117 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
UPK1A-201ENST00000222275 Q6ZTI0 123 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 NUDT10Q8NFP7 164 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 NUDT11Q96G61 164 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 FAM210BQ96KR6 192 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 RPP21Q9H633 154 aaKnown RBP9.66□□□□□ -0.86
UPK1A-201ENST00000222275 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
UPK1A-201ENST00000222275 A0A1W2PPQ1 181 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 GRIFINA4D1Z8 144 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 H3BVH4 76 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 GATCO43716 136 aaKnown RBP9.65□□□□□ -0.86
UPK1A-201ENST00000222275 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 TCTAP57738 103 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 PNRC1Q12796 327 aaPredicted RBP9.65□□□□□ -0.86
UPK1A-201ENST00000222275 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 CT83Q5H943 113 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 OSTCQ9NRP0 149 aa9.65□□□□□ -0.86
UPK1A-201ENST00000222275 A8MWL6 223 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 F2Z2F3 143 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 OR5AL1P0C617 328 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
UPK1A-201ENST00000222275 SLAQ13239 276 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 ADIRFQ15847 76 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 ZFP82Q8N141 532 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
UPK1A-201ENST00000222275 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
UPK1A-201ENST00000222275 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
UPK1A-201ENST00000222275 A8MWV9 139 aa9.63□□□□□ -0.87
UPK1A-201ENST00000222275 SNAI2O43623 268 aa9.63□□□□□ -0.87
UPK1A-201ENST00000222275 RPL19P84098 196 aaKnown RBP9.63□□□□□ -0.87
UPK1A-201ENST00000222275 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
UPK1A-201ENST00000222275 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
UPK1A-201ENST00000222275 SSBP4Q9BWG4 385 aaPredicted RBP9.63□□□□□ -0.87
UPK1A-201ENST00000222275 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
UPK1A-201ENST00000222275 TRAV4A0A0B4J268 109 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 TMEM218A2RU14 115 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 F5H768 121 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 HTN3P15516 51 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 CACNG7P62955 275 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 OR10G8Q8NGN5 311 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
UPK1A-201ENST00000222275 PKD1P98161 4303 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 F8W036 122 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 PPP1R2P9O14990 202 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 SPANXN1Q5VSR9 72 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 WDR73Q6P4I2 378 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 SEC11CQ9BY50 192 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 GFRA4Q9GZZ7 299 aa9.61□□□□□ -0.87
UPK1A-201ENST00000222275 HERC2O95714 4834 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 DNAH11Q96DT5 4516 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 IGLL5B9A064 214 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 RHODO00212 210 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 IGLC6P0CF74 106 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 TSKUQ8WUA8 353 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
UPK1A-201ENST00000222275 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 H3BNG1 76 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 M0R381 172 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 RS1O15537 224 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 MT-ND4LP03901 98 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 FOXA3P55318 350 aaPredicted RBP9.59□□□□□ -0.87
UPK1A-201ENST00000222275 DMRTA1Q5VZB9 504 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 ZFP2Q6ZN57 461 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 TPPP3Q9BW30 176 aa9.59□□□□□ -0.87
UPK1A-201ENST00000222275 MUC4Q99102 2169 aa9.58□□□□□ -0.88
UPK1A-201ENST00000222275 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
UPK1A-201ENST00000222275 NXPH4O95158 308 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms