RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 ZNF493Q6ZR52 646 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
CSTF1-201ENST00000217109 SMIM2Q9BVW6 85 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 ZZEF1O43149 2961 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 K7ERJ3 54 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 ZNF479Q96JC4 524 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 AJUBAQ96IF1 538 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 TAX1BP3O14907 124 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 PLNP26678 52 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 MTURNQ8N3F0 131 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
CSTF1-201ENST00000217109 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
CSTF1-201ENST00000217109 IGHV7-4-1A0A0J9YVY3 117 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 EBI3Q14213 229 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 Q6ZQT7 251 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 ZNF418Q8TF45 676 aaPredicted RBP7.48□□□□□ -1.21
CSTF1-201ENST00000217109 MRAP2Q96G30 205 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 TNFRSF18Q9Y5U5 241 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 C16orf54Q6UWD8 224 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 LINC01587Q99440 93 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 ZFAND3Q9H8U3 227 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 KNCNA6PVL3 124 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
CSTF1-201ENST00000217109 MRPS12O15235 138 aaKnown RBP7.48□□□□□ -1.21
CSTF1-201ENST00000217109 IGLC6P0CF74 106 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 DEFB112Q30KQ8 113 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
CSTF1-201ENST00000217109 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 NDUFS8O00217 210 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 Q8N6K4 173 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 RAX2Q96IS3 184 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 TP53TG1Q9Y2A0 90 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 LAMA5O15230 3695 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
CSTF1-201ENST00000217109 OCIAD2Q56VL3 154 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 VCX2Q9H322 139 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 LRBAP50851 2863 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 DCHS1Q96JQ0 3298 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 H3BRM9 83 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 VCYO14598 125 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 C10orf105Q8TEF2 133 aa7.47□□□□□ -1.21
CSTF1-201ENST00000217109 K7EP13 123 aa7.46□□□□□ -1.21
CSTF1-201ENST00000217109 DEFB131AP59861 70 aa7.46□□□□□ -1.21
CSTF1-201ENST00000217109 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.21
CSTF1-201ENST00000217109 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 PRB1P04280 392 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 C11orf21Q9P2W6 132 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 ZFHX4Q86UP3 3567 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 TRBV25-1A0A075B6N4 114 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 F8VRH5 84 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.22
CSTF1-201ENST00000217109 C9orf47Q6ZRZ4 202 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 LINC01356Q8N9X3 169 aa7.46□□□□□ -1.22
CSTF1-201ENST00000217109 DUSP14O95147 198 aaKnown RBP7.45□□□□□ -1.22
CSTF1-201ENST00000217109 ACANP16112 2415 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 SLC25A16P16260 332 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 SAMD13Q5VXD3 122 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 DOPEY1Q5JWR5 2465 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 ODF1Q14990 250 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 MRPL53Q96EL3 112 aaKnown RBP7.45□□□□□ -1.22
CSTF1-201ENST00000217109 JPT2Q9H910 190 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 PRRC2AP48634 2157 aaKnown RBP7.45□□□□□ -1.22
CSTF1-201ENST00000217109 FN1P02751 2386 aaKnown RBP7.45□□□□□ -1.22
CSTF1-201ENST00000217109 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 PRADC1Q9BSG0 188 aa7.45□□□□□ -1.22
CSTF1-201ENST00000217109 GEMIN7Q9H840 131 aaKnown RBP7.45□□□□□ -1.22
CSTF1-201ENST00000217109 A0A087WX48 190 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 TRAV2A0A0B4J234 112 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 PRSS29PA6NIE9 313 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 FXYD2P54710 66 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 AMTNQ6UX39 209 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 RNF185Q96GF1 192 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 TRAV8-2A0A0B4J237 113 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 Q6ZS46 218 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
CSTF1-201ENST00000217109 ANKRD17O75179 2603 aaKnown RBP7.44□□□□□ -1.22
CSTF1-201ENST00000217109 TCTEX1D4Q5JR98 221 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 PAPPA-AS1Q5QFB9 102 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 LENEPQ9Y5L5 61 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 JMJD1CQ15652 2540 aa7.44□□□□□ -1.22
CSTF1-201ENST00000217109 IGHG2P01859 326 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 CD28P10747 220 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 DSCR9P59020 149 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 PGPEP1Q9NXJ5 209 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 IGKV2D-26A0A0A0MRZ7 120 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 A0A1W2PPM0 123 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 CLPSL1A2RUU4 121 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 HLA-DRB4P13762 266 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 CDKN1BP46527 198 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 HLA-DRB4X5D2U9 266 aa7.43□□□□□ -1.22
CSTF1-201ENST00000217109 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 CIDEAO60543 219 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 UBE2E2Q96LR5 201 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms