RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 C16orf54Q6UWD8 224 aa13.17□□□□□ -0.3
PTPN18-201ENST00000175756 PRSS29PA6NIE9 313 aa13.16□□□□□ -0.3
PTPN18-201ENST00000175756 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
PTPN18-201ENST00000175756 RAX2Q96IS3 184 aa13.16□□□□□ -0.3
PTPN18-201ENST00000175756 SPOCK3Q9BQ16 436 aa13.16□□□□□ -0.3
PTPN18-201ENST00000175756 OVOL3O00110 214 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 HHLA3Q9XRX5 114 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 TP53TG1Q9Y2A0 90 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 TRBV7-1A0A0A6YYK4 115 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 OOSP1A8MZH6 123 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 NDUFS8O00217 210 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 UFSP1Q6NVU6 142 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 NAV2Q8IVL1 2488 aa13.15□□□□□ -0.3
PTPN18-201ENST00000175756 TRBV12-3P01733 135 aa13.15□□□□□ -0.31
PTPN18-201ENST00000175756 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.31
PTPN18-201ENST00000175756 IGHV3-73A0A0B4J1V6 119 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 C9orf139Q6ZV77 190 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 LY6G5BQ8NDX9 201 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 ASH1LQ9NR48 2969 aaKnown RBP13.14□□□□□ -0.31
PTPN18-201ENST00000175756 H3BUX3 64 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 UBE2E1P51965 193 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 JPT2Q9H910 190 aa13.14□□□□□ -0.31
PTPN18-201ENST00000175756 K7ENP7 123 aa13.13□□□□□ -0.31
PTPN18-201ENST00000175756 KLRB1Q12918 225 aa13.13□□□□□ -0.31
PTPN18-201ENST00000175756 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
PTPN18-201ENST00000175756 RELNP78509 3460 aa13.13□□□□□ -0.31
PTPN18-201ENST00000175756 PKD1L2Q7Z442 2459 aa13.13□□□□□ -0.31
PTPN18-201ENST00000175756 TRAV12-2A0A075B6T6 113 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 DUSP14O95147 198 aaKnown RBP13.12□□□□□ -0.31
PTPN18-201ENST00000175756 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 A0A1B0GV72 72 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 F8W1H4 67 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 IGHG4P01861 327 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 RRN3P1Q2M238 152 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 DUX5Q96PT3 197 aa13.12□□□□□ -0.31
PTPN18-201ENST00000175756 ID1P41134 155 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 RPL39P62891 51 aaKnown RBP13.11□□□□□ -0.31
PTPN18-201ENST00000175756 IGF2-ASQ6U949 168 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 PTH2Q96A98 100 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 MRAP2Q96G30 205 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 NPC2P61916 151 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 MOB4Q9Y3A3 225 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 HIGD1BQ9P298 99 aa13.11□□□□□ -0.31
PTPN18-201ENST00000175756 ODF3BA8MYP8 253 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 OVOL1O14753 267 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 DLX4Q92988 240 aaPredicted RBP13.1□□□□□ -0.31
PTPN18-201ENST00000175756 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 PRR9Q5T870 116 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 CSMD1Q96PZ7 3565 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
PTPN18-201ENST00000175756 INSL3P51460 131 aa13.09□□□□□ -0.31
PTPN18-201ENST00000175756 FASNP49327 2511 aaKnown RBP13.09□□□□□ -0.31
PTPN18-201ENST00000175756 IGHV4-39P01824 125 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 GATD1Q8NB37 220 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 SPAG8Q99932 426 aaPredicted RBP13.08□□□□□ -0.32
PTPN18-201ENST00000175756 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 C20orf173Q96LM9 149 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 CKS1BP61024 79 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 ADORA2A-AS1P86434 159 aa13.08□□□□□ -0.32
PTPN18-201ENST00000175756 SDHAF1A6NFY7 115 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 ADARB2-AS1A8MUL3 147 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 ATP5J2P56134 94 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 BLCAPP62952 87 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 NRACQ8N912 160 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 ZNF48Q96MX3 618 aaPredicted RBP13.07□□□□□ -0.32
PTPN18-201ENST00000175756 COL27A1Q8IZC6 1860 aaPredicted RBP13.07□□□□□ -0.32
PTPN18-201ENST00000175756 C20orf78Q9BR46 151 aa13.07□□□□□ -0.32
PTPN18-201ENST00000175756 PPP1R17O96001 155 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 BAALCQ8WXS3 180 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 PLEKHB2Q96CS7 222 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 A0A0U1RRA0 63 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 LGALS1P09382 135 aaKnown RBP13.06□□□□□ -0.32
PTPN18-201ENST00000175756 TMEM95Q3KNT9 176 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 ZFP2Q6ZN57 461 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 RASL10AQ92737 203 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 IGHV7-4-1A0A0J9YVY3 117 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
PTPN18-201ENST00000175756 OPRPNQ99935 248 aaPredicted RBP13.05□□□□□ -0.32
PTPN18-201ENST00000175756 TM2D2Q9BX73 214 aa13.05□□□□□ -0.32
PTPN18-201ENST00000175756 E9PLD3 99 aa13.05□□□□□ -0.32
PTPN18-201ENST00000175756 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
PTPN18-201ENST00000175756 VCX2Q9H322 139 aa13.05□□□□□ -0.32
PTPN18-201ENST00000175756 VCYO14598 125 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 SPINK13Q1W4C9 94 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 RNASE13Q5GAN3 156 aaKnown RBP13.04□□□□□ -0.32
PTPN18-201ENST00000175756 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 A8MWV9 139 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 CLEC2AQ6UVW9 174 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 SPXQ9BT56 116 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms