RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 RBMY1CP0DJD4 496 aa11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 CITED1Q99966 193 aa11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 SAMD10Q9BYL1 202 aa11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 TIMM8BQ9Y5J9 83 aaPredicted RBP11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 MUC4Q99102 2169 aa11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 VWFP04275 2813 aa11.5□□□□□ -0.57
LAPTM4A-201ENST00000175091 IGHV1OR15-1A0A075B7D0 117 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 CD7P09564 240 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 RAB4AP20338 218 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 EVI2AP22794 236 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 AMTP48728 403 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 FXYD7P58549 80 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 ATRQ13535 2644 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 PMCHP20382 165 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 PRELID3AQ96N28 172 aa11.49□□□□□ -0.57
LAPTM4A-201ENST00000175091 IGHV3-16A0A0C4DH30 117 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 CYSRT1A8MQ03 144 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 M0R381 172 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 HSBP1O75506 76 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 BEAN1Q3B7T3 259 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 SMIM15Q7Z3B0 74 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 NIT1Q86X76 327 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 Q8N1Y9 231 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 CHCHD1Q96BP2 118 aaKnown RBP11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 C9orf85Q96MD7 179 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
LAPTM4A-201ENST00000175091 SPRY2O43597 315 aa11.47□□□□□ -0.57
LAPTM4A-201ENST00000175091 NCR2O95944 276 aa11.47□□□□□ -0.57
LAPTM4A-201ENST00000175091 PPBPP02775 128 aa11.47□□□□□ -0.57
LAPTM4A-201ENST00000175091 CKS2P33552 79 aa11.47□□□□□ -0.57
LAPTM4A-201ENST00000175091 JOSD1Q15040 202 aaPredicted RBP11.47□□□□□ -0.57
LAPTM4A-201ENST00000175091 Q6ZWC4 215 aa11.47□□□□□ -0.57
LAPTM4A-201ENST00000175091 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
LAPTM4A-201ENST00000175091 TRPT1Q86TN4 253 aaKnown RBP11.46□□□□□ -0.57
LAPTM4A-201ENST00000175091 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
LAPTM4A-201ENST00000175091 NPYP01303 97 aa11.46□□□□□ -0.58
LAPTM4A-201ENST00000175091 CMC4P56277 68 aaPredicted RBP11.46□□□□□ -0.58
LAPTM4A-201ENST00000175091 STHQ8IWL8 128 aa11.46□□□□□ -0.58
LAPTM4A-201ENST00000175091 AP1S3Q96PC3 154 aa11.46□□□□□ -0.58
LAPTM4A-201ENST00000175091 LAMTOR2Q9Y2Q5 125 aa11.46□□□□□ -0.58
LAPTM4A-201ENST00000175091 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
LAPTM4A-201ENST00000175091 LINC00614P0C842 121 aa11.45□□□□□ -0.58
LAPTM4A-201ENST00000175091 CDPF1Q6NVV7 123 aa11.45□□□□□ -0.58
LAPTM4A-201ENST00000175091 C20orf144Q9BQM9 153 aa11.45□□□□□ -0.58
LAPTM4A-201ENST00000175091 C19orf73Q9NVV2 129 aa11.45□□□□□ -0.58
LAPTM4A-201ENST00000175091 GAS8-AS1O95177 125 aa11.44□□□□□ -0.58
LAPTM4A-201ENST00000175091 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
LAPTM4A-201ENST00000175091 MDFICQ9P1T7 246 aa11.44□□□□□ -0.58
LAPTM4A-201ENST00000175091 IGHV1-24A0A0C4DH33 117 aa11.44□□□□□ -0.58
LAPTM4A-201ENST00000175091 INSP01308 110 aa11.44□□□□□ -0.58
LAPTM4A-201ENST00000175091 DPH3P1Q9H4G8 78 aa11.44□□□□□ -0.58
LAPTM4A-201ENST00000175091 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
LAPTM4A-201ENST00000175091 AP5S1Q9NUS5 200 aa11.43□□□□□ -0.58
LAPTM4A-201ENST00000175091 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
LAPTM4A-201ENST00000175091 INSL3P51460 131 aa11.42□□□□□ -0.58
LAPTM4A-201ENST00000175091 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
LAPTM4A-201ENST00000175091 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
LAPTM4A-201ENST00000175091 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
LAPTM4A-201ENST00000175091 WFDC10AQ9H1F0 79 aa11.42□□□□□ -0.58
LAPTM4A-201ENST00000175091 TRAV26-2A0A0B4J265 109 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 CBY3A6NI87 242 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 TNFRSF6BO95407 300 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 NRACQ8N912 160 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 PRSS3P2Q8NHM4 247 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 PMCHL1Q16048 86 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 FA2HQ7L5A8 372 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 KIF25-AS1Q9Y6Z4 181 aa11.41□□□□□ -0.58
LAPTM4A-201ENST00000175091 LOC389332A0A1B0GUA5 103 aa11.4□□□□□ -0.58
LAPTM4A-201ENST00000175091 C9orf66Q5T8R8 295 aa11.4□□□□□ -0.58
LAPTM4A-201ENST00000175091 GSN-AS1Q9NRJ2 163 aa11.4□□□□□ -0.58
LAPTM4A-201ENST00000175091 LINC00315P59091 139 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 NUTF2P61970 127 aaKnown RBP11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 KRTAP24-1Q3LI83 254 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 XCL2Q9UBD3 114 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 TRRAPQ9Y4A5 3859 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 JPT2Q9H910 190 aa11.39□□□□□ -0.59
LAPTM4A-201ENST00000175091 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
LAPTM4A-201ENST00000175091 MGPP08493 103 aa11.38□□□□□ -0.59
LAPTM4A-201ENST00000175091 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
LAPTM4A-201ENST00000175091 A0A096LNJ9 63 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 LINC01546A6NGU7 62 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 HTN1P15515 57 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 KRTDAPP60985 99 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 C1orf158Q8N1D5 194 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 LINC01587Q99440 93 aa11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 NXT2Q9NPJ8 142 aaKnown RBP11.37□□□□□ -0.59
LAPTM4A-201ENST00000175091 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms