RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DEFB136Q30KP8 78 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 TCTEX1D4Q5JR98 221 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 FOXI2Q6ZQN5 318 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 WFDC11Q8NEX6 87 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 OR1N2Q8NGR9 330 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 C4orf3Q8WVX3 66 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 WFDC12Q8WWY7 111 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 UTP20O75691 2785 aaKnown RBP6.18□□□□□ -1.42
VAMP3-201ENST00000054666 ABCA12Q86UK0 2595 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 NXPH4O95158 308 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 NUDT3O95989 172 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 IGKV3-20P01619 116 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 PRSS1P07477 247 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 COX8AP10176 69 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 SUMO2P61956 95 aaKnown RBP6.18□□□□□ -1.42
VAMP3-201ENST00000054666 ORMDL2Q53FV1 153 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 C20orf78Q9BR46 151 aa6.18□□□□□ -1.42
VAMP3-201ENST00000054666 K7EMI3 77 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 SPRY2O43597 315 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 CD5LO43866 347 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 SYT8Q8NBV8 401 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 KLHL30-AS1Q8NEE0 82 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 OR11H1Q8NG94 326 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 DYNLRB2Q8TF09 96 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 ZNF25P17030 456 aaPredicted RBP6.17□□□□□ -1.42
VAMP3-201ENST00000054666 SPINK13Q1W4C9 94 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 C12orf54Q6X4T0 127 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 OR9G4Q8NGQ1 327 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 FOXC2Q99958 501 aa6.17□□□□□ -1.42
VAMP3-201ENST00000054666 MAP1AP78559 2803 aaPredicted RBP6.17□□□□□ -1.42
VAMP3-201ENST00000054666 TRAV12-2A0A075B6T6 113 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 DNAJC9-AS1A6NH13 148 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 J3QKU1 62 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 G0S2P27469 103 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 C18orf65Q6ZTR6 163 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 STPG4Q8N801 248 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 RASL10AQ92737 203 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 TP73-AS1Q9UF72 201 aa6.16□□□□□ -1.42
VAMP3-201ENST00000054666 IGHV1OR15-1A0A075B7D0 117 aa6.15□□□□□ -1.42
VAMP3-201ENST00000054666 TRAV2A0A0B4J234 112 aa6.15□□□□□ -1.42
VAMP3-201ENST00000054666 ODF1Q14990 250 aa6.15□□□□□ -1.42
VAMP3-201ENST00000054666 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
VAMP3-201ENST00000054666 RPL39LQ96EH5 51 aaKnown RBP6.15□□□□□ -1.42
VAMP3-201ENST00000054666 DKK2Q9UBU2 259 aa6.15□□□□□ -1.42
VAMP3-201ENST00000054666 TRGV11A0A075B6L2 103 aa6.15□□□□□ -1.43
VAMP3-201ENST00000054666 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.43
VAMP3-201ENST00000054666 DPM2O94777 84 aa6.15□□□□□ -1.43
VAMP3-201ENST00000054666 IGKCP01834 107 aa6.15□□□□□ -1.43
VAMP3-201ENST00000054666 PLA2G2AP14555 144 aa6.15□□□□□ -1.43
VAMP3-201ENST00000054666 SCGB2A2Q13296 93 aa6.15□□□□□ -1.43
VAMP3-201ENST00000054666 Q6ZSV7 163 aa6.15□□□□□ -1.43
VAMP3-201ENST00000054666 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 NMUP48645 174 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 DEFB131AP59861 70 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 MPV17L2Q567V2 206 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 HIST2H2BCQ6DN03 193 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 POM121L12Q8N7R1 296 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 C9orf85Q96MD7 179 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 ZANQ9Y493 2812 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 F5H697 171 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 HLA-DRB4P13762 266 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 ADAMTSL5Q6ZMM2 481 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 Q8N1Y9 231 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 DUX3Q96PT4 197 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 CSTL1Q9H114 145 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 HLA-DRB4X5D2U9 266 aa6.14□□□□□ -1.43
VAMP3-201ENST00000054666 CENPEQ02224 2701 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 A0A087WWL8 130 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 CBY3A6NI87 242 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 DLEU1O43261 78 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 TCTAP57738 103 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 FAM74A4Q5TZK3 123 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 SUMO4Q6EEV6 95 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 TMEM61Q8N0U2 210 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 TOMM6Q96B49 74 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 SCGB3A1Q96QR1 104 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 TMEM208Q9BTX3 173 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 MUC4Q99102 2169 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 KNCNA6PVL3 124 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 FGF6P10767 208 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 PLNP26678 52 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 RPL32P62910 135 aaKnown RBP6.13□□□□□ -1.43
VAMP3-201ENST00000054666 GAGE1Q13065 139 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 ZNF56Q15929 161 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 BVES-AS1Q5T3Y7 98 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 AMTNQ6UX39 209 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 BOD1L2Q8IYS8 172 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 DLX4Q92988 240 aaPredicted RBP6.13□□□□□ -1.43
VAMP3-201ENST00000054666 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 ZMAT4Q9H898 229 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 YAE1D1Q9NRH1 226 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
VAMP3-201ENST00000054666 A0A087WX48 190 aa6.12□□□□□ -1.43
VAMP3-201ENST00000054666 TRAV12-1A0A0B4J245 112 aa6.12□□□□□ -1.43
VAMP3-201ENST00000054666 TMEM97Q5BJF2 176 aa6.12□□□□□ -1.43
VAMP3-201ENST00000054666 C2orf66Q6UXQ4 117 aa6.12□□□□□ -1.43
VAMP3-201ENST00000054666 C2orf91Q6ZV80 131 aa6.12□□□□□ -1.43
VAMP3-201ENST00000054666 TMEM160Q9NX00 188 aa6.12□□□□□ -1.43
VAMP3-201ENST00000054666 MRPL35Q9NZE8 188 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms