RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Zfp27P10077 819 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Myct1Q8R411 188 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 C1ql3Q9ESN4 255 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Notch3Q61982 2318 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm933J3QPC1 141 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Wbp1lQ8BGW2 348 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gpr82Q8BZR0 328 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Q8CDS7 251 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr523Q8VFE7 317 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Psg18B2RSG7 476 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Sf3b6P59708 125 aaKnown RBP11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm12888Q3UW77 119 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Hapln4Q80WM4 400 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Fbxo46Q8BG80 603 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Marveld3Q9D956 376 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Defb5Q9EPV9 64 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ly75Q60767 1723 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm867A0A1W2P7T4 151 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm10097J3KMK7 105 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Rnase2O35291 155 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Prss50Q8BLH5 439 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Trem3Q9JKE1 183 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Pxt1Q8K459 51 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Dll3O88516 592 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P04212 136 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 SnrpcQ62241 159 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Pappa2E9PZ87 1789 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Brca1P48754 1812 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr749E9Q438 313 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ascl2O35885 263 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Q8CF25 301 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Neurl3Q8CJC5 254 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Phpt1Q9DAK9 124 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Slc25a15Q9WVD5 301 aa11.97□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm10665K7N6B7 321 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm614Q3V2K1 191 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr1199Q8VF94 310 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Fbxo15Q9QZN0 433 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Zswim8Q3UHH1 1832 aaKnown RBP11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Apobec4Q497M3 374 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Rbfox3Q8BIF2 374 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Usf3B2RUQ2 2221 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm39566A0A1B0GT45 1251 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Oxgr1Q6IYF8 337 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Hbb-b2P02089 147 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Acp7Q8BX37 438 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Il1f10Q8R459 152 aa11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 ChtopQ9CY57 249 aaKnown RBP11.96□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Mpig6bD7PDD4 242 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Hist1h4aP62806 103 aaKnown RBP11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Wfdc18P62810 74 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Tmem177Q8BPE4 311 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Loxl4Q924C6 757 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Gm17732E9Q5I2 61 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 SergefQ80YD6 464 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 TskuQ8CBR6 354 aa11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Ncor2Q9WU42 2472 aaKnown RBP11.96□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Znf503Q7TMA2 652 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Gm20854Q62461 227 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Fbxl15Q91W61 300 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Gm5225J3QPL3 108 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Igh-3P01867 404 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Fgf5P15656 264 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 CampP51437 172 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Otx1P80205 355 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 H2-DMb2Q31099 261 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Znf329Q6GQR8 522 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Pla2g3Q8BZT7 504 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Dnase2bQ9QY48 354 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Prpf8Q99PV0 2335 aaKnown RBP11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 P03976 113 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 MymxQ2Q5T5 84 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Olfr968Q8VFN4 314 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Ccl28Q9JIL2 130 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Akip1Q9JJR5 212 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Rnf39A2RT81 352 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Nutf2P61971 127 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Prss48Q14B25 312 aa11.95□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Cxcl1P12850 96 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 CortP56469 109 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Nkain3Q3URJ8 181 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Nhlrc1Q8BR37 401 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Tnrc6aQ3UHK8 1896 aaKnown RBP11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Trav14n-3A0A075B645 120 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 D930048N14RikA2AA67 225 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Lcn2P11672 200 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Tcl1b1P56840 116 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Sdr39u1Q5M8N4 308 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Srd5a2Q99N99 254 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Iah1Q9DB29 249 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Gm8251F6VUT6 1994 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Gm20403G3UYB0 123 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Ighv1-42A0A0A6YY38 117 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Ss18Q62280 418 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 MosP00536 390 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Smim19Q80ZU4 107 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Gatad1Q920S3 266 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Q9D727 114 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Srxn1Q9D975 136 aa11.94□□□□□ -0.5
Col5a1-201ENSMUST00000028280 Suclg1Q9WUM5 346 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms