RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SAPCD1Q5SSQ6 148 aa7.17□□□□□ -1.26
PHGDH-222ENST00000641587 PRR27Q6MZM9 219 aa7.17□□□□□ -1.26
PHGDH-222ENST00000641587 IGF2BP2-AS1Q96M15 143 aa7.17□□□□□ -1.26
PHGDH-222ENST00000641587 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
PHGDH-222ENST00000641587 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
PHGDH-222ENST00000641587 ZFP30Q9Y2G7 519 aa7.17□□□□□ -1.26
PHGDH-222ENST00000641587 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
PHGDH-222ENST00000641587 TRBV20OR9-2A0A075B6H5 130 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 TRBV6-1A0A0K0K1D8 114 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 M0R036 132 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 TSPOP30536 169 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 FXYD7P58549 80 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 CSNK1G2-AS1Q8NCQ2 148 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 TVP23CQ96ET8 276 aa7.16□□□□□ -1.26
PHGDH-222ENST00000641587 M0R2Z0 102 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 APOC3P02656 99 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 GPX1P07203 203 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 P0DMU3 169 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 FAM231AP0DMU4 169 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 FAM231CP0DMU5 169 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 SPINK13Q1W4C9 94 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 SMUG1Q53HV7 270 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 MORN3Q6PF18 240 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-222ENST00000641587 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 OCC1Q8TAD7 63 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 ODF3Q96PU9 254 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 BIN3Q9NQY0 253 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 CARHSP1Q9Y2V2 147 aaKnown RBP7.15□□□□□ -1.26
PHGDH-222ENST00000641587 LENEPQ9Y5L5 61 aa7.15□□□□□ -1.26
PHGDH-222ENST00000641587 NACAE9PAV3 2078 aa7.15□□□□□ -1.27
PHGDH-222ENST00000641587 K7EN84 100 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 GCGP01275 180 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 RNASE4P34096 147 aaKnown RBP7.14□□□□□ -1.27
PHGDH-222ENST00000641587 NUTF2P61970 127 aaKnown RBP7.14□□□□□ -1.27
PHGDH-222ENST00000641587 RPL23P62829 140 aaKnown RBP7.14□□□□□ -1.27
PHGDH-222ENST00000641587 PNRC1Q12796 327 aaPredicted RBP7.14□□□□□ -1.27
PHGDH-222ENST00000641587 OR5I1Q13606 314 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 LGALS9BQ3B8N2 356 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 LINC01551Q86U37 167 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 NDUFAF3Q9BU61 184 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 SDF2L1Q9HCN8 221 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 LY96Q9Y6Y9 160 aa7.14□□□□□ -1.27
PHGDH-222ENST00000641587 TRAV12-2A0A075B6T6 113 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 TRBV7-9A0A0J9YWB2 115 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 CDKN1BP46527 198 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 BTN1A1Q13410 526 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 C10orf91Q5T1B1 145 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 FAM162BQ5T6X4 162 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 AMTNQ6UX39 209 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 Q6ZR54 194 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 UBE2DNLQ8IWF7 75 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 SVBPQ8N300 66 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 ZFAND2AQ8N6M9 145 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 DAZAP1Q96EP5 407 aaKnown RBP7.13□□□□□ -1.27
PHGDH-222ENST00000641587 XCL2Q9UBD3 114 aa7.13□□□□□ -1.27
PHGDH-222ENST00000641587 C7orf71A4D174 169 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 A8MTW9 85 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 SH2D1AO60880 128 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 SNAPINO95295 136 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 INSP01308 110 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 CRISP2P16562 243 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 S100A1P23297 94 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 EMP1P54849 157 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 ERVFC1-1P60608 527 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 KIR3DS1Q14943 382 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 PRR9Q5T870 116 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 C15orf54Q8N8G6 183 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 CLRN3Q8NCR9 226 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 ISOC2Q96AB3 205 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 FAM19A4Q96LR4 140 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 CLUHP3Q96NS8 147 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 MLST8Q9BVC4 326 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 NAGKQ9UJ70 344 aa7.12□□□□□ -1.27
PHGDH-222ENST00000641587 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 TRAV21A0A0B4J279 112 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 FABP5P3A8MUU1 101 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 KLLNB2CW77 178 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 P01737 135 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 PFN1P07737 140 aaKnown RBP7.11□□□□□ -1.27
PHGDH-222ENST00000641587 ZNF80P51504 273 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-222ENST00000641587 IBA57Q5T440 356 aaKnown RBP7.11□□□□□ -1.27
PHGDH-222ENST00000641587 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 SFRP2Q96HF1 295 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
PHGDH-222ENST00000641587 HERC1Q15751 4861 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
PHGDH-222ENST00000641587 IGHV3OR16-12A0A075B7B8 117 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 ZNF705GA8MUZ8 300 aaPredicted RBP7.1□□□□□ -1.27
PHGDH-222ENST00000641587 B4DEV8 164 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 GATCO43716 136 aaKnown RBP7.1□□□□□ -1.27
PHGDH-222ENST00000641587 ORM1P02763 201 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 MT-ND4LP03901 98 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 HTN3P15516 51 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 RHEBQ15382 184 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 OR10G8Q8NGN5 311 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 TMEM208Q9BTX3 173 aa7.1□□□□□ -1.27
PHGDH-222ENST00000641587 C1QTNF4Q9BXJ3 329 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms